Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03407 and BPUM_2023
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03407___ypfB.1.24716.seq
# -bsequence dna-align/BPUM_2023___ypfB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03407___ypfB-BPUM_2023___ypfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03407___ypfB-BPUM_2023___ypfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03407___ypfB
# 2: BPUM_2023___ypfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 117/199 (58.8%)
# Similarity: 117/199 (58.8%)
# Gaps: 38/199 (19.1%)
# Score: 276.0
#
#
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BSNT_03407___ 1 ATGAAAACATTTGAACGGCTGCTGATCAAATTA-----TTGTTCATTCAG 45
|||||.|||.|.||| .|.||.|.|| ||| .||.||||||||
BPUM_2023___y 1 ATGAAGACAATGGAA-AGATGGTTAT----TTAAAGCGGTGCTCATTCAG 45
BSNT_03407___ 46 GCCATCATTTTACTTGGTGTCCAATTT---CTT--TTTCACTATCAGCAT 90
....||.|||||.|.|..||.||..|| ||| |||.||.| .||.|
BPUM_2023___y 46 CTTGTCTTTTTATTAGCCGTTCAGATTACACTTCATTTGACGA-AAGGA- 93
BSNT_03407___ 91 ATTGAACCATACGTATCAAAAGTGATTCAATATGAAGGGGTGGATAACAT 140
||||.||...|.||||||||..|.|||||.||.||.||..|||||||
BPUM_2023___y 94 ---GAACTATTTTTGTCAAAAGTCGTGCAATACGAGGGTGTAAATAACAT 140
BSNT_03407___ 141 GGAGGGGGACAAT-AAGATT-----GAAACCTTCAAAC------ATTAA 177
||| ||.| |||||| ||.||.||.||.| |||.|
BPUM_2023___y 141 -GAG-----CATTGAAGATTGGATCGAGACGTTTAAGCAGAAGGATTGA 183
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