Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03405 and BPUM_2022
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03405___cmk.1.24716.seq
# -bsequence dna-align/BPUM_2022___cmk.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03405___cmk-BPUM_2022___cmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03405___cmk-BPUM_2022___cmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03405___cmk
# 2: BPUM_2022___cmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 503/706 (71.2%)
# Similarity: 503/706 (71.2%)
# Gaps: 59/706 ( 8.4%)
# Score: 1754.0
#
#
#=======================================
BSNT_03405___ 1 ATGGAAAAGAAATTATCGATTGCAATTGACGGCCCGGCAGCTGCGGGGAA 50
|||.|||||||||||||.||.|||||||||||.||.||.||.||.||.||
BPUM_2022___c 1 ATGAAAAAGAAATTATCTATCGCAATTGACGGTCCTGCTGCAGCAGGAAA 50
BSNT_03405___ 51 AAGCACCGTTGCCAAAATTGTGGCTGAGAAAAAATCGTACATATATATTG 100
||||||.||.||.||||||||.||.|..||||||||.||.||.|||||.|
BPUM_2022___c 51 AAGCACTGTGGCAAAAATTGTCGCAGCAAAAAAATCATATATTTATATCG 100
BSNT_03405___ 101 ATACAGGAGCAATGTATCGGGCGATTACGTAC--GCGGCTTTACAGGAAA 148
|||||||.||.|||||.||.|||||||| || |||||..|.| |
BPUM_2022___c 101 ATACAGGTGCCATGTACCGAGCGATTAC--ACTTGCGGCACTTC-----A 143
BSNT_03405___ 149 AC-----GTTGATC-TGACAGATGAAGAAAAACTGGCTGAGCTGCT---- 188
|| ||.|||| ||| ||||||..|...|||.|.||..||.||
BPUM_2022___c 144 ACATGGTGTAGATCTTGA-AGATGAGCAGGCACTTGATGCACTACTGAAA 192
BSNT_03405___ 189 AAAGCGGACAGACATTGAGCTAATTACAACAAAAGATGGACAAAAAGTGC 238
||| ||.|..|||||.||..|..|||||...||.||.||||||||.|
BPUM_2022___c 193 AAA----ACTGTGATTGAACTTGTCTCAACAGGCGAGGGTCAAAAAGTTC 238
BSNT_03405___ 239 TTGTAAACGGCACAGATGTAACTGAGGCGATCAGAACAGATGAAGTCAGC 288
.|.||.||...||||||||.||.||||.|||..|.||||||...||.|||
BPUM_2022___c 239 ATCTAGACAATACAGATGTGACAGAGGAGATTCGCACAGATCGCGTGAGC 288
BSNT_03405___ 289 AACCAAGTTTCAATTGCGGCCAAGCACAGAAGTGTCAGAGAAGAAATGGT 338
||||||||.||..|||..||.|||||||||..|||..|.|||||||||||
BPUM_2022___c 289 AACCAAGTATCGGTTGTCGCAAAGCACAGAGCTGTTCGGGAAGAAATGGT 338
BSNT_03405___ 339 GAAACGC---CAGCAGCAGCTTGGGGAAAAAGGCGGCGTCGTCATGGATG 385
.||| ||.||..|||||||..||||||||||.|||||||||||.|
BPUM_2022___c 339 ---CCGCAGGCAACAAGAGCTTGGTAAAAAAGGCGGTGTCGTCATGGACG 385
BSNT_03405___ 386 GTCGTGACATCGGGACGCATGTGCTGCCAAATGCAGAAGTAAAAATCTTT 435
|..|.|||||.||.|||||.||.||.||..||||.|||||.|||||| ||
BPUM_2022___c 386 GAAGAGACATAGGTACGCACGTTCTTCCTGATGCCGAAGTGAAAATC-TT 434
BSNT_03405___ 436 CTT--TTGGCATCTGTTGAAGAGAGAGCGAAACGCCGTTATGAAGAAAAT 483
||| || ||.|||||.|||||.|||||.||||||||.|.|||.||.|||
BPUM_2022___c 435 CTTGCTT-GCCTCTGTAGAAGAAAGAGCAAAACGCCGCTTTGAGGAGAAT 483
BSNT_03405___ 484 GTGAAAAAAGGCTTTGATGTCAACTACGA--AACATTAATTGAGGAAATT 531
..|||||||||||..||||||||.||||| |.| |.|||||.||.|||
BPUM_2022___c 484 CAGAAAAAAGGCTACGATGTCAATTACGATCAGC--TGATTGAAGAGATT 531
BSNT_03405___ 532 GCAAGAAGAGACAAGCTTGATTCAGAGCGCGAAGTATCTCCGCTGCGTAA 581
|||||..|.|||||||||||.||.|||||||||||.||||||||....||
BPUM_2022___c 532 GCAAGGCGTGACAAGCTTGACTCTGAGCGCGAAGTTTCTCCGCTAAAGAA 581
BSNT_03405___ 582 AGCAGAAGACGCTCTTGAAATCGACACGACATCGCTTTCCATTCAAGAGG 631
|||.||.||.||..|||||||.|||||.||.||.||||||||||||||||
BPUM_2022___c 582 AGCGGATGATGCCATTGAAATTGACACCACTTCTCTTTCCATTCAAGAGG 631
BSNT_03405___ 632 TAGCTGATAAAATCCTCGAGGCTGTGGAGCAAAAGTCCCGCTGA------ 675
||||.|.||||||..|.|| ||.||||.| ||||..|
BPUM_2022___c 632 TAGCAGGTAAAATTTTAGA-----TGCAGCAGA----CCGCGTAGAGAAA 672
BSNT_03405___ 675 ------ 675
BPUM_2022___c 673 CAGTAA 678
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