Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03400 and BPUM_2019
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03400.1.24716.seq
# -bsequence dna-align/BPUM_2019.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03400-BPUM_2019.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03400-BPUM_2019.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03400
# 2: BPUM_2019
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 97/195 (49.7%)
# Similarity: 97/195 (49.7%)
# Gaps: 78/195 (40.0%)
# Score: 304.5
#
#
#=======================================
BSNT_03400 1 ------------------------------------------------AT 2
||
BPUM_2019 1 ATGAAAAAAACAAGAGGTGACACCCTAATGGATGAGGAGGGATGTATGAT 50
BSNT_03400 3 GGGAAAAGACAGACAAGAGAAAAAAC---TCAAAGCTTCAGGCAGAGTCG 49
|||||.|||.||||||| |||||| |.||.||.|||...|||||.|
BPUM_2019 51 GGGAAGAGATAGACAAG---AAAAACGTTTAAAGGCATCAAAAAGAGTGG 97
BSNT_03400 50 AATCAGACCGCGACCAGTCCATTCACTATGACGGAGCGACAAGC-CTTGA 98
||||.|||||.||.||.||||||||.|||.|.||.||.|| ||| ||.||
BPUM_2019 98 AATCCGACCGTGATCAATCCATTCATTATAAAGGGGCAAC-AGCACTAGA 146
BSNT_03400 99 A----CAAA------ACGGAAGATTCAAAAAGCGAAAATC-ATAA 132
| ||.| ||| |||||| ||||| ||||
BPUM_2019 147 AGGTCCAGATAGCGCACG--------AAAAAG---AAATCAATAA 180
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