Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03396 and BPUM_2016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03396.1.24716.seq
# -bsequence dna-align/BPUM_2016.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03396-BPUM_2016.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03396-BPUM_2016.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03396
# 2: BPUM_2016
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 134/204 (65.7%)
# Similarity: 134/204 (65.7%)
# Gaps: 18/204 ( 8.8%)
# Score: 358.0
#
#
#=======================================
BSNT_03396 1 ATGAGTGAATCTC--TTACGA--AAGTGATTTTGTCTGTAATCACGACAA 46
||| |.||| |.| || || ||.|.||..|..||||....||.||||
BPUM_2016 1 ATG-GCGAA-CACCATT--GAACAATTTATACTCGCTGTGGCTACAACAA 46
BSNT_03396 47 ATCCAAACAGGGTTGCA--GGGGGAGCACCTGTCTTTTTTTGCAATGACC 94
|| |||.||.|...|| ||.|||.||.|.||.|||||.|| |||..
BPUM_2016 47 AT--AAAGAGCGAGTCATGGGCGGAACAGCAGTTTTTTTCTG---TGAAA 91
BSNT_03396 95 A-AAAGGAGA--TGGAGCTTTTCGCTAAAAATCTTGAGGCGATCCTTGAT 141
| ||||.||| |.||..|.|.|||.|..|||.|.|||||.||..|.|||
BPUM_2016 92 ATAAAGAAGAACTCGACATGTACGCGATGAATTTAGAGGCCATTTTAGAT 141
BSNT_03396 142 GGAATAGCTCACAGAATCGGAGATGACGTGTATTTGATCGTGAAACATTT 191
||.||.||.|||.||||.|||||.|||.|.||.|||||.||.||||||||
BPUM_2016 142 GGCATTGCACACGGAATTGGAGAAGACCTTTACTTGATTGTCAAACATTT 191
BSNT_03396 192 TTAA 195
||||
BPUM_2016 192 TTAA 195
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