Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03395 and BPUM_2015
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03395___engA.1.24716.seq
# -bsequence dna-align/BPUM_2015___engA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03395___engA-BPUM_2015___engA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03395___engA-BPUM_2015___engA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03395___engA
# 2: BPUM_2015___engA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1312
# Identity: 1050/1312 (80.0%)
# Similarity: 1050/1312 (80.0%)
# Gaps: 2/1312 ( 0.2%)
# Score: 4190.0
#
#
#=======================================
BSNT_03395___ 1 ATGGGTAAACCTGTCGTAGCCATTGTCGGGAGACCAAATGTAGGAAAATC 50
||||||||||||||||||||||||||.||.||.||.||.||.||||||||
BPUM_2015___e 1 ATGGGTAAACCTGTCGTAGCCATTGTTGGAAGGCCCAACGTTGGAAAATC 50
BSNT_03395___ 51 CACAATCTTTAACCGGATTGCGGGAGAAAGAATTTCAATAGTAGAAGATA 100
.|||||.|||||.||.||.||.||.||||||||.||.||.||||||||.|
BPUM_2015___e 51 TACAATTTTTAATCGAATCGCAGGCGAAAGAATATCGATTGTAGAAGACA 100
BSNT_03395___ 101 CCCCTGGCGTGACAAGGGATCGGATATACAGCTCGGCTGAATGGCTGAAT 150
|.|||||.||.|||||.|||||.||.||.|||||.|||||||||.|.|||
BPUM_2015___e 101 CACCTGGTGTAACAAGAGATCGAATTTATAGCTCTGCTGAATGGTTAAAT 150
BSNT_03395___ 151 TATGATTTTAATTTGATTGATACGGGCGGTATTGATATCGGTGATGAGCC 200
|||||.|||||.||.||.|||||.||.||.||||||||.|||||||||||
BPUM_2015___e 151 TATGACTTTAACTTAATAGATACTGGTGGAATTGATATTGGTGATGAGCC 200
BSNT_03395___ 201 GTTCTTAGCGCAGATTCGCCAGCAGGCTGAAATCGCCATGGATGAAGCGG 250
.||.||||||||.||||||||.||.||.|||||.||.|||||||||||||
BPUM_2015___e 201 ATTTTTAGCGCAAATTCGCCATCAAGCAGAAATTGCAATGGATGAAGCGG 250
BSNT_03395___ 251 ACGTGATTATTTTTATGGTGAACGGCCGTGAAGGTGTGACAGCTGCTGAT 300
|.||.||.||.|||||||||||.|||||.||.|||||||||.|.||.|||
BPUM_2015___e 251 ATGTCATCATCTTTATGGTGAATGGCCGAGATGGTGTGACATCAGCGGAT 300
BSNT_03395___ 301 GAAGAAGTGGCGAAAATTTTGTACCGCACAAAAAAGCCTGTTGTTTTAGC 350
||||||||.||.||||||||.||.|||||.||||||||.|||||..|.||
BPUM_2015___e 301 GAAGAAGTCGCAAAAATTTTATATCGCACGAAAAAGCCAGTTGTACTTGC 350
BSNT_03395___ 351 GGTTAATAAACTGGATAACACAGAAATGAG-AGCGAATATTTATGATTTT 399
.||||||||||||||.|||.|.|||||||| ||.| ||.|.|||||.|||
BPUM_2015___e 351 TGTTAATAAACTGGACAACCCTGAAATGAGAAGTG-ATGTGTATGACTTT 399
BSNT_03395___ 400 TATTCGCTAGGCTTTGGCGAGCCGTATCCAATTTCGGGAACACACGGACT 449
|||.|.|||||.|||||.|||||.|||||.|||||.|||||.||||||.|
BPUM_2015___e 400 TATGCACTAGGGTTTGGTGAGCCATATCCGATTTCTGGAACGCACGGATT 449
BSNT_03395___ 450 CGGACTGGGTGATTTACTGGATGCCGTTGCAGAGCATTTTAAAAACATTC 499
.||.||.||||||.||||.|||||.||||||||.||.|||||.|||.|.|
BPUM_2015___e 450 AGGTCTTGGTGATCTACTTGATGCAGTTGCAGAACACTTTAAGAACTTAC 499
BSNT_03395___ 500 CAGAAACGAAATACAATGAGGAAGTTGTTCAATTCTGTCTGATCGGACGT 549
||||.|||.|.||..||||..|||||||.||.|||||..|.||.||.||.
BPUM_2015___e 500 CAGATACGCAGTATGATGAACAAGTTGTCCAGTTCTGCTTAATTGGCCGC 549
BSNT_03395___ 550 CCGAATGTCGGAAAGTCTTCACTTGTGAATGCGATGCTCGGCGAAGAACG 599
||||||||.||.||.|||||..|.|||||||||||||||||.|||||.||
BPUM_2015___e 550 CCGAATGTAGGGAAATCTTCTTTAGTGAATGCGATGCTCGGAGAAGACCG 599
BSNT_03395___ 600 CGTTATTGTCAGCAACGTGGCTGGAACGACAAGAGATGCTGTTGATACGT 649
|||.||||||||||||.|.||.||.||.||.|||||||||||.||||||.
BPUM_2015___e 600 CGTCATTGTCAGCAACATCGCCGGCACAACGAGAGATGCTGTCGATACGA 649
BSNT_03395___ 650 CATTTACTTACAACCAGCAGGAGTTTGTCATTGTCGATACTGCAGGTATG 699
..|||.|.|||||.||||..||.|||||||||||.|||||.|||||||||
BPUM_2015___e 650 TGTTTGCGTACAATCAGCGTGACTTTGTCATTGTTGATACAGCAGGTATG 699
BSNT_03395___ 700 CGAAAAAAAGGGAAAGTCTATGAAACGACTGAGAAGTATAGTGTACTGCG 749
.||||||||||.|||||.||.|||||.||.|||||.||.|||||.||.||
BPUM_2015___e 700 AGAAAAAAAGGAAAAGTATACGAAACAACAGAGAAATACAGTGTGCTTCG 749
BSNT_03395___ 750 GGCGCTAAAAGCGATTGACCGCTCAGAAGTCGTGGCGGTTGTGCTGGATG 799
.||..|||||||.|||||.||.||.||.||.||.||.|||||.||.||.|
BPUM_2015___e 750 TGCATTAAAAGCCATTGATCGTTCTGATGTTGTCGCTGTTGTTCTAGACG 799
BSNT_03395___ 800 GCGAAGAAGGCATTATTGAACAGGACAAGCGTATCGCCGGTTATGCACAC 849
|.|||||||||||||||||.||.||.||.|||||.||.||.|||||||||
BPUM_2015___e 800 GTGAAGAAGGCATTATTGAGCAAGATAAACGTATTGCAGGCTATGCACAC 849
BSNT_03395___ 850 GAAGCGGGCAAGGCCGTCGTCATCGTCGTAAACAAATGGGATGCTGTTGA 899
|||||.||.||.|||||.||.|||||.||.|||||||||||.||||||||
BPUM_2015___e 850 GAAGCTGGTAAAGCCGTTGTAATCGTTGTGAACAAATGGGACGCTGTTGA 899
BSNT_03395___ 900 CAAAGATGAGAGCACAATGAAAGAATTTGAAGAAAATATTCGCGATCATT 949
.|||||||||.|.||.|||||.||||||||..||||.|||||.||.||||
BPUM_2015___e 900 AAAAGATGAGCGTACGATGAAGGAATTTGAGCAAAACATTCGTGAGCATT 949
BSNT_03395___ 950 TTCAATTTCTGGATTATGCGCCAATCCTATTTATGTCTGCCTTAACGAAA 999
|||||||.||.||||||||.||..||.|||||||||||||..|.||||||
BPUM_2015___e 950 TTCAATTCCTAGATTATGCACCTGTCTTATTTATGTCTGCTCTCACGAAA 999
BSNT_03395___ 1000 AAACGGATCCATACGCTGATGCCTGCGATTATTAAAGCAAGTGAAAATCA 1049
||..|.||.||||||.|.|||||..|.|||||||.|||.|||||||||||
BPUM_2015___e 1000 AAGAGAATTCATACGTTAATGCCGTCCATTATTACAGCTAGTGAAAATCA 1049
BSNT_03395___ 1050 TTCACTTCGAGTTCAGACGAACGTCTTAAATGATGTCATCATGGATGCTG 1099
|.|..|.||.|||||.|||||..|.||.||.|||.|||||||||||||.|
BPUM_2015___e 1050 TGCGATGCGCGTTCAAACGAATATTTTGAACGATATCATCATGGATGCAG 1099
BSNT_03395___ 1100 TGGCAATGAACCCGACACCGACTCATAACGGTTCTCGTTTGAAAATTTAC 1149
|.||||||||.||.||||||||.||.||.||....||..||||||||||.
BPUM_2015___e 1100 TCGCAATGAATCCAACACCGACACACAATGGACAGCGCCTGAAAATTTAT 1149
BSNT_03395___ 1150 TATGCGACTCAAGTGTCGGTAAAGCCGCCAAGCTTCGTTGTGTTTGTAAA 1199
||||||||.||.|||.|..|.|||||.||...|||.||||||||||||||
BPUM_2015___e 1150 TATGCGACACAGGTGGCCATTAAGCCTCCGTCCTTTGTTGTGTTTGTAAA 1199
BSNT_03395___ 1200 CGATCCGGAATTGATGCATTTTTCATACGAACGGTTTTTAGAAAACCGAA 1249
||||||.||..|.|||||.|||||.||.|||||.||..||||||||||.|
BPUM_2015___e 1200 CGATCCAGAGCTTATGCACTTTTCTTATGAACGTTTCCTAGAAAACCGTA 1249
BSNT_03395___ 1250 TCAGAGACGCGTTCGGTTTTGAGGGGACACCAATCAAAATATTTGCAAGA 1299
|..||||.|||||.||||||||.||.|||||.||.|||||||||||.|||
BPUM_2015___e 1250 TTCGAGATGCGTTTGGTTTTGAAGGAACACCGATTAAAATATTTGCGAGA 1299
BSNT_03395___ 1300 GCTAGAAAATAA 1311
||.|||||||||
BPUM_2015___e 1300 GCGAGAAAATAA 1311
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