Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03388 and BPUM_2010

See Amino acid alignment / Visit BSNT_03388 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_03388___hbs.1.24716.seq
#    -bsequence dna-align/BPUM_2010___hbs.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03388___hbs-BPUM_2010___hbs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03388___hbs-BPUM_2010___hbs.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03388___hbs
# 2: BPUM_2010___hbs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     249/279 (89.2%)
# Similarity:   249/279 (89.2%)
# Gaps:           0/279 ( 0.0%)
# Score: 1125.0
# 
#
#=======================================

BSNT_03388___      1 ATGAACAAAACAGAACTTATCAATGCGGTTGCTGAAGCAAGCGAATTGTC     50
                     ||||||||.|||||||||||.||.||||||||||||||||||||.||.||
BPUM_2010___h      1 ATGAACAAGACAGAACTTATTAACGCGGTTGCTGAAGCAAGCGAGTTATC     50

BSNT_03388___     51 TAAAAAAGACGCTACAAAAGCAGTTGACTCTGTTTTTGATACGATCTTAG    100
                     ||||||||||||.||||||||||||||.||||||||||||||.||.||||
BPUM_2010___h     51 TAAAAAAGACGCGACAAAAGCAGTTGATTCTGTTTTTGATACAATTTTAG    100

BSNT_03388___    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTTGGTAACTTC    150
                     |||||||||||||.|||||.|||||||||||.|||||||||||||||||.
BPUM_2010___h    101 ATGCACTTAAAAATGGTGACAAAATCCAACTTATCGGTTTTGGTAACTTT    150

BSNT_03388___    151 GAGGTGCGTGAACGTTCTGCACGTAAAGGACGCAACCCTCAAACAGGTGA    200
                     ||.||.|||||.|||||.||.|||||||||||.|||||.|||||.||||.
BPUM_2010___h    151 GAAGTACGTGAGCGTTCAGCTCGTAAAGGACGTAACCCACAAACTGGTGC    200

BSNT_03388___    201 AGAAATCGAAATTCCAGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250
                     |||.||||||||.||.||||||||||||||||||||||||||||||||||
BPUM_2010___h    201 AGAGATCGAAATCCCTGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250

BSNT_03388___    251 CGCTTAAAGACGCAGTTGCCGGAAAATAA    279
                     |.|||||||||||.||.||.||.||||||
BPUM_2010___h    251 CACTTAAAGACGCGGTGGCAGGTAAATAA    279


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