Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03386 and BPUM_2009

See Amino acid alignment / Visit BSNT_03386 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_03386___folE.1.24716.seq
#    -bsequence dna-align/BPUM_2009___folE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03386___folE-BPUM_2009___folE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03386___folE-BPUM_2009___folE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03386___folE
# 2: BPUM_2009___folE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     454/582 (78.0%)
# Similarity:   454/582 (78.0%)
# Gaps:          21/582 ( 3.6%)
# Score: 1784.0
# 
#
#=======================================

BSNT_03386___      1 ATGAAAGAAGTTAATAAAGAGCAAATCGAACAAGCTGTTCGTCAAATTTT     50
                     ||||..|||.|.||||||||.|.|||||||||.||.||.||..|.||.||
BPUM_2009___f      1 ATGAGTGAAATAAATAAAGAACTAATCGAACACGCAGTACGCGATATATT     50

BSNT_03386___     51 AGAAGCGATCGGAGAAGACCCGAATAGAGAAGGGCTTCTTGATACTCCGA    100
                     |.||||.|||||||||||.||..||.|.|||||.|||||||||||.||.|
BPUM_2009___f     51 AAAAGCCATCGGAGAAGATCCAGATCGTGAAGGACTTCTTGATACCCCTA    100

BSNT_03386___    101 AAAGAGTCGCAAAGATGTATGCCGAAGTATTCTCCGGCTTGAATGAAGAT    150
                     ||.||||.|||||.|||||||..|||||.|||||.||.||.|||||||||
BPUM_2009___f    101 AACGAGTAGCAAAAATGTATGAAGAAGTGTTCTCGGGATTAAATGAAGAT    150

BSNT_03386___    151 CCAAAAGAACATTTCCAGACTATCTTCGGTGAAAACCATGAGGAGCTTGT    200
                     ||||||||||||||..|.||.||.||.||||||.||||.||.||.||.||
BPUM_2009___f    151 CCAAAAGAACATTTTAAAACCATTTTTGGTGAAGACCACGAAGAACTCGT    200

BSNT_03386___    201 TCTTGTAAAAGATATCGCGTTTCATTCTATGTGTGAGCATCACCTTGTTC    250
                     |||||||||||||||.||.||.|||||.||||||||.||.||||||||.|
BPUM_2009___f    201 TCTTGTAAAAGATATTGCTTTCCATTCAATGTGTGAACACCACCTTGTAC    250

BSNT_03386___    251 CCTTTTATGGAAAAGCACATGTTGCATATATCCCGCGAGGCGGAAAGGTC    300
                     |.|||||.||||||||.|||||.||.|||||.|||||.||||||||.||.
BPUM_2009___f    251 CTTTTTACGGAAAAGCTCATGTCGCTTATATTCCGCGCGGCGGAAAAGTG    300

BSNT_03386___    301 ACAGGACTCAGCAAACTGGCACGTGCCGTTGAAGCCGTTGCAAAGCGCCC    350
                     ||||||||.||||||||.|||.|.||.||.||.||.|||||.||.|||||
BPUM_2009___f    301 ACAGGACTTAGCAAACTTGCAAGAGCTGTAGAGGCTGTTGCCAAACGCCC    350

BSNT_03386___    351 GCAGCTTCAGGAACGCATCACTTCTACAATTGCAGAAAGCATCGTAGAAA    400
                     |||||||||||||||||||||.||.||.||||||||.||.||.||.||||
BPUM_2009___f    351 GCAGCTTCAGGAACGCATCACATCGACCATTGCAGATAGTATGGTGGAAA    400

BSNT_03386___    401 CGCTTGATCCGCATGGCGTAATGGTAGTGGTTGAAGCGGAACACATGTGC    450
                     |.||..|||||||||||||.|||.|.||.||||||||.||.||.|||||.
BPUM_2009___f    401 CACTCAATCCGCATGGCGTGATGATTGTCGTTGAAGCAGAGCATATGTGT    450

BSNT_03386___    451 ATGACGATGCGCGGTGTAAGAAAACCGGGTGCGAAAACTGTGACTTCAGC    500
                     ||||||||||||||.||.|.||||||.||.||.|||||.|||||||||||
BPUM_2009___f    451 ATGACGATGCGCGGAGTGAAAAAACCAGGCGCAAAAACAGTGACTTCAGC    500

BSNT_03386___    501 AGTCAGAGGCGTT---TTTAAAGATGATGCCGCTGCCCGTGCAGAAGT--    545
                     |||   |.|||.|   |||..|.|||||||.||.||..|.||||||||  
BPUM_2009___f    501 AGT---ACGCGGTACATTTGCAAATGATGCAGCGGCAAGAGCAGAAGTGC    547

BSNT_03386___    546 ----ATTGGAACATATTAAACGCCAGGACTAA    573
                         .||      |||||||   .|.||||||
BPUM_2009___f    548 TTTCCTT------TATTAAA---AACGACTAA    570


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