Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03366 and BPUM_1995
See
Amino acid alignment /
Visit
BSNT_03366 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence dna-align/BSNT_03366___trpB.1.24716.seq
# -bsequence dna-align/BPUM_1995___trpB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03366___trpB-BPUM_1995___trpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03366___trpB-BPUM_1995___trpB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03366___trpB
# 2: BPUM_1995___trpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1217
# Identity: 902/1217 (74.1%)
# Similarity: 902/1217 (74.1%)
# Gaps: 31/1217 ( 2.5%)
# Score: 3227.5
#
#
#=======================================
BSNT_03366___ 1 ATGTATCCATATCCGAATGAAATAGGCAGATACGGTGATTTTGGCGGAAA 50
|||||..|||||||.|||||..|.|||||.||.||.||.|||||.||.||
BPUM_1995___t 1 ATGTACGCATATCCAAATGAGCTTGGCAGGTATGGAGAATTTGGAGGGAA 50
BSNT_03366___ 51 GTTTGTTCCGGAAACACTCATGCAGCCGTTAGATGAAATAGAAACAGCAT 100
.||||||||.||.||||||||||||||..|..|.|||||||||..|||||
BPUM_1995___t 51 ATTTGTTCCTGAGACACTCATGCAGCCACTCAAAGAAATAGAACAAGCAT 100
BSNT_03366___ 101 TTAAACAAATCAAGGATGATCCCGCTTTTCGTG-AAGAGTATTATAAGCT 149
||||..||.|.||.||.||.||||||||| |.| ||||.|||..|...||
BPUM_1995___t 101 TTAACGAATTAAAAGAAGACCCCGCTTTT-GAGCAAGAATATCTTTCTCT 149
BSNT_03366___ 150 GTTAAAGGACTATTCCGGACGGCCGACTGCATTAACATACGCTGATCGAG 199
.||..|..|||||||.||..|.|||||||||.|.|||||.||.||||.|.
BPUM_1995___t 150 ATTGCACAACTATTCAGGCAGACCGACTGCACTGACATATGCCGATCAAT 199
BSNT_03366___ 200 TCACTGAATACTTAGGCGGCGCGAAAATCTATTTGAAACGAGAAGATTTA 249
|..|||.||||.|.||||||||.|||||||||||.|||.|||||||||||
BPUM_1995___t 200 TATCTGCATACCTCGGCGGCGCAAAAATCTATTTAAAAAGAGAAGATTTA 249
BSNT_03366___ 250 AACCATACAGGTTCTCATAAAATCAATAATGCGCTAGGTCAAGCGCTGCT 299
||||||||||||.|||||||||||||.|||||.||.|||||.||.|||||
BPUM_1995___t 250 AACCATACAGGTGCTCATAAAATCAACAATGCACTTGGTCAGGCCCTGCT 299
BSNT_03366___ 300 TGCTAAAAAAATGGGCAAAACGAAAATCATTGCTGAAACCGGTGCCGGCC 349
|||.|||||||||||||||.|.||.|||||.||.|||||.||.||.||.|
BPUM_1995___t 300 TGCAAAAAAAATGGGCAAATCAAACATCATCGCAGAAACAGGCGCTGGAC 349
BSNT_03366___ 350 AGCATGGCGTTGCCGCTGCAACAGTTGCAGCCAAATTCGGCTTTTCCTGT 399
||||.||.||.||.||||||||.||.||.||.||.||.||.||.||.||.
BPUM_1995___t 350 AGCACGGAGTAGCAGCTGCAACGGTGGCTGCAAAGTTTGGATTATCGTGC 399
BSNT_03366___ 400 ACTGTGTTTATGGGTGAAGAGGATGTTGCCCGCCAGTCTCTGAACGTTTT 449
||.||.||||||||..||||.|||||.|...|.||.||.||.||.||.||
BPUM_1995___t 400 ACGGTATTTATGGGAAAAGAAGATGTGGAGAGACAATCACTCAATGTATT 449
BSNT_03366___ 450 CCGCATGAAGCTTCTTGGAGCGGAGGTAGTGCCTGTAACAAGCGGAAACG 499
|||.||||||||.|||||.||.||.||..|.|||||.|||||.|||||||
BPUM_1995___t 450 CCGAATGAAGCTCCTTGGCGCTGAAGTTATACCTGTCACAAGTGGAAACG 499
BSNT_03366___ 500 GAACATTGAAGGATGCCACAAATGAGGCGATCCGGTACTGGGTTCAGCAT 549
|.|||||.||.|||||.|||||.||.|||||.||.||||||||||||||.
BPUM_1995___t 500 GCACATTAAAAGATGCGACAAACGAAGCGATTCGTTACTGGGTTCAGCAC 549
BSNT_03366___ 550 TGTGAG-GATCACTTTTATATGATTGGATCAGTTGTCGGCCCGCATCCTT 598
||| || |||||.||.||||||||.||.||||||||.||.||.||.||.|
BPUM_1995___t 550 TGT-AGTGATCATTTCTATATGATAGGTTCAGTTGTAGGACCTCACCCGT 598
BSNT_03366___ 599 ATCCGCAGGTGGTCCGTGAATTTCAAAAAATGATCGGAGAGGAAGCGAAG 648
||||.||..|.|||.||||.||.||....|||||.||.||.|||||.||.
BPUM_1995___t 599 ATCCCCAAATCGTCAGTGAGTTCCAGCGGATGATTGGTGATGAAGCAAAA 648
BSNT_03366___ 649 GATCAGTTG---AAACGTATTGAAGGCACTCTGCCTGATAAAGTAGTGGC 695
||.|||.|| ||| |..|||||||..||.||..|||||||..|.||
BPUM_1995___t 649 GAGCAGATGCTTAAA---AAAGAAGGCAGGCTCCCACATAAAGTCATTGC 695
BSNT_03366___ 696 ATGTGTAGGCGGAGGAAGCAATGCGATGGGTATGTTTCAGGCATTTTTAA 745
.|||||.||.||.|||||.||||||||.||.||||..|..||.|||||..
BPUM_1995___t 696 TTGTGTCGGTGGCGGAAGTAATGCGATTGGAATGTACCGAGCGTTTTTGG 745
BSNT_03366___ 746 ATGAAGATGTTGAACTGATCGGCGCTGAAGCAGCAGGAAAAGGAATTGAT 795
||||.||.|||||..||||.||.|..|||||.||.|||||||||||||||
BPUM_1995___t 746 ATGATGAGGTTGATTTGATTGGTGTAGAAGCGGCTGGAAAAGGAATTGAT 795
BSNT_03366___ 796 ACGCCTCTTCATGCCGCCACTATTTCGAAAGGAACCGTAGGGGTTATTCA 845
||.||.||||||||.||.||.|||.||||.||.||...||||||.|||||
BPUM_1995___t 796 ACACCGCTTCATGCAGCAACCATTACGAAGGGGACAAAAGGGGTCATTCA 845
BSNT_03366___ 846 CGGTTCATTGACTTATCTCATTCAGGATGAGTTCGGGCAAATTATTGAGC 895
.||.||.|||||.|||.|.||.||.||.||.|||||.||.||||||||||
BPUM_1995___t 846 TGGATCTTTGACCTATTTAATCCAAGACGAATTCGGCCAGATTATTGAGC 895
BSNT_03366___ 896 CCTACTCTATTTCAGCCGGTCTCGACTATCCTGGAATCGGTCCGGAGCAT 945
||||.||.||||||||.|||.|.||.|||||.||.|||||.||.|||||.
BPUM_1995___t 896 CCTATTCCATTTCAGCTGGTTTAGATTATCCCGGGATCGGACCAGAGCAC 945
BSNT_03366___ 946 GCATACTTGCATAAGAGCGGCCGTG-TCACTTATGACAGTATCACTGATG 994
||.||.||.|||..|||.||.|||| ||| .||||..|||...||.|||.
BPUM_1995___t 946 GCCTATTTACATGCGAGTGGACGTGTTCA-ATATGTGAGTGCTACAGATC 994
BSNT_03366___ 995 AAGAAGCGGTGGATGCATTAAAGCTTTTGTCAGAAAAAGAGGGGATTTTG 1044
|||||||..||||||||.|||||||..||.|||||||.||.||.|||.|.
BPUM_1995___t 995 AAGAAGCCCTGGATGCACTAAAGCTGCTGACAGAAAAGGAAGGAATTCTA 1044
BSNT_03366___ 1045 CCGGCAATCGAATCTGCCCATGCGTTAGCGAAAGCA-TTCAAACTCGCCA 1093
||.||.||.|||||.||.||.||.|||||.||.||| ||.|.|...||
BPUM_1995___t 1045 CCAGCGATTGAATCAGCACACGCTTTAGCCAAGGCATTTGAGATGAGC-- 1092
BSNT_03366___ 1094 AAGGA--ATGGATCGCGGTCAACTCATTCTCGTCTGTTTATCAGGACGGG 1141
|||| |||..|...|.|.||.||||.||.|||||..|.||||||.|.|
BPUM_1995___t 1093 -AGGACGATGAGTGAAGATGAAATCATCCTTGTCTGCCTCTCAGGAAGAG 1141
BSNT_03366___ 1142 GAGACAAGGATGTCAACACATTAATGAATGT-ATTGGAAGAAGAGGTGAA 1190
||||.||||||||..|.|||||||||||||| .|||.||| .||||..||
BPUM_1995___t 1142 GAGATAAGGATGTGCATACATTAATGAATGTGCTTGAAAG-TGAGGGCAA 1190
BSNT_03366___ 1191 AGCCCATGTTTAA---- 1203
|.|| ||
BPUM_1995___t 1191 AACC-------AAATGA 1200
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.