Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03355 and BPUM_1986
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence dna-align/BSNT_03355___qcrB.1.24716.seq
# -bsequence dna-align/BPUM_1986___qcrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03355___qcrB-BPUM_1986___qcrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03355___qcrB-BPUM_1986___qcrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03355___qcrB
# 2: BPUM_1986___qcrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 682
# Identity: 560/682 (82.1%)
# Similarity: 560/682 (82.1%)
# Gaps: 14/682 ( 2.1%)
# Score: 2304.0
#
#
#=======================================
BSNT_03355___ 1 ATGCTGAACAAAATTTATGACTGGGTAGACGAGCGGCTTGATATTACACC 50
|||||.|||||.||||||||.||||||||.||||||||.||.||||||||
BPUM_1986___q 1 ATGCTTAACAAGATTTATGATTGGGTAGATGAGCGGCTGGACATTACACC 50
BSNT_03355___ 51 GATGTGGAGGGATATTGCCGATCACGAAGTACCGGAACATGTGAATCCCG 100
.||.|||||.||||||||.|||||.||.||.||.||.|||||.|||||.|
BPUM_1986___q 51 AATATGGAGAGATATTGCGGATCATGAGGTGCCTGAGCATGTCAATCCAG 100
BSNT_03355___ 101 CCCATCATTTCTCTGCGTTTGTGTATTGCTTTGGGGGACTGACGTTTTTT 150
|.|||||||||||.||.||||||||.||.|||||.||..|.|||||||||
BPUM_1986___q 101 CACATCATTTCTCCGCTTTTGTGTACTGTTTTGGCGGTTTAACGTTTTTT 150
BSNT_03355___ 151 GTAACCGTTATCCAAGTATTATCTGGAATGTTTTTAACGATGTATTATGT 200
||.||.||.||.|||||..|.||.||.||||||||||||||||||||.||
BPUM_1986___q 151 GTGACAGTCATACAAGTCCTTTCGGGCATGTTTTTAACGATGTATTACGT 200
BSNT_03355___ 201 GCCTGATATCAAAAATGCCTGGGAATCGGTATATTATTTGCAAAATGAAG 250
|||.|||||.|||||.||.||||||||.||.||||||||.||||||||||
BPUM_1986___q 201 GCCAGATATTAAAAACGCATGGGAATCTGTTTATTATTTACAAAATGAAG 250
BSNT_03355___ 251 TGGCATTCGGCCAGATTGTCAGGGGGATGCACCACTGGGGTGCGAGCCTG 300
|||||||.||.||||||||.||.|||||||||||||||||||||||..|.
BPUM_1986___q 251 TGGCATTTGGTCAGATTGTTAGAGGGATGCACCACTGGGGTGCGAGTTTA 300
BSNT_03355___ 301 GTCATTGTGATGATGTTTTTACATACGCTGAGGGTCTTTTTCCAAGGTGC 350
||.|||||.||||||||||||||||||||.|||||||||||||||||.||
BPUM_1986___q 301 GTTATTGTCATGATGTTTTTACATACGCTAAGGGTCTTTTTCCAAGGGGC 350
BSNT_03355___ 351 GTATAAAAAACCGCGCGAGCTGAACTGGATTGTCGGTGTGCTGATCTTTT 400
|||||||||.||..|.|||||.|||||||||||.||||||||.||.||.|
BPUM_1986___q 351 GTATAAAAAGCCTAGAGAGCTCAACTGGATTGTTGGTGTGCTCATTTTCT 400
BSNT_03355___ 401 TTGTTATGCTCGGTCTTGGCTTTACAGGCTA---CTTGCTTCCTTGGGAT 447
||||.|||||.||||||||.||||||||.|| |||| ||.||||||
BPUM_1986___q 401 TTGTGATGCTTGGTCTTGGATTTACAGGTTATCTCTTG---CCATGGGAT 447
BSNT_03355___ 448 ATGAAGGCTCTGTTTGCAACAAAAGTCGGGCTGCAGATCGCCGAAGCCAC 497
||||||||.||.|||||.||.||.||.||.||.||.||.||.|||||.||
BPUM_1986___q 448 ATGAAGGCGCTATTTGCGACGAAGGTTGGTCTTCAAATTGCAGAAGCGAC 497
BSNT_03355___ 498 GCCTTTGATCGGAACGCAAG---TTAAAACGCTCCTTGCAGGGCATCCGG 544
.|||||.||.|| |.||| |.||||||||.||||||||.|||||.|
BPUM_1986___q 498 ACCTTTCATTGG---GAAAGAGATCAAAACGCTGCTTGCAGGTCATCCTG 544
BSNT_03355___ 545 ATATTGTAGGCGCCCAAACGCTGACTAGGTTTTTTGCGATCCATGTATTT 594
|.||||||||.||.|||||||||||.||.|||||.||.|||||||| .||
BPUM_1986___q 545 ACATTGTAGGGGCACAAACGCTGACGAGATTTTTCGCTATCCATGT-CTT 593
BSNT_03355___ 595 TTTCTT-CCTGCCGCATTGTTCGGGCTGATGGCTGCACATTTTATTATGA 643
|||||| ||.||.|||||.||.||||||||||||||.||.||||||||||
BPUM_1986___q 594 TTTCTTGCCAGCGGCATTATTTGGGCTGATGGCTGCCCACTTTATTATGA 643
BSNT_03355___ 644 TCCGGAAGCAGGGGATTTCAGGACCGCTTTAA 675
|.||.|||||.||.|||||.||||||||.|||
BPUM_1986___q 644 TTCGTAAGCAAGGAATTTCTGGACCGCTATAA 675
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