Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01075 and BPUM_1949

See Amino acid alignment / Visit BSNT_01075 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:42
# Commandline: needle
#    -asequence dna-align/BSNT_01075.1.24716.seq
#    -bsequence dna-align/BPUM_1949.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01075-BPUM_1949.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01075-BPUM_1949.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01075
# 2: BPUM_1949
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     294/333 (88.3%)
# Similarity:   294/333 (88.3%)
# Gaps:           0/333 ( 0.0%)
# Score: 1314.0
# 
#
#=======================================

BSNT_01075         1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAACAGAAGGCTGTAGA     50
                     ||||||||||||||||||||||||||||||||.||||||||||||||.||
BPUM_1949          1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTCAAACAGAAGGCTGTGGA     50

BSNT_01075        51 AATGAGATTGGCAGGCGTACCTATGAAAGAGATCATGCAGGAGTTGAATA    100
                     ||||||.|||||||||||||||||||||||||||||||||.|.|||||||
BPUM_1949         51 AATGAGGTTGGCAGGCGTACCTATGAAAGAGATCATGCAGAAATTGAATA    100

BSNT_01075       101 TCAAAAATAATACGCAGATTAAGACATGGGTCAGATGGTATAAGGCTGGT    150
                     ||||.|||||.||||||.||.||||||||||.||||||.||||.|||||.
BPUM_1949        101 TCAAGAATAAGACGCAGGTTCAGACATGGGTGAGATGGCATAAAGCTGGG    150

BSNT_01075       151 GATACACATCGATTTGAACAGCCTGTTGGTAAGCAATACACTTATGGAAA    200
                     ||||||||..|.||.|||||.||||||||.||.|||||.||.||||||||
BPUM_1949        151 GATACACACAGGTTCGAACAACCTGTTGGAAAACAATATACCTATGGAAA    200

BSNT_01075       201 AGGTCCGGAGTATTCTTCCGAATTAGAGAAACTGCAGGCAGAGAATCGAT    250
                     .|||||.|||||.|||||.||||||||||.|||.||||||||.|||||.|
BPUM_1949        201 GGGTCCCGAGTACTCTTCTGAATTAGAGAGACTACAGGCAGAAAATCGCT    250

BSNT_01075       251 ATCTGAGACAACAGAATGAAGTGTTAAAAAAGTACAACGAATTGGAAAGG    300
                     ||.||||.||||||||||||||.|||||||||||||||||||||||||||
BPUM_1949        251 ATTTGAGTCAACAGAATGAAGTTTTAAAAAAGTACAACGAATTGGAAAGG    300

BSNT_01075       301 AAGTTGATAGCCAAACGTCAGTCGAACTTGTAG    333
                     |||||||||...||||||||.||.||||.||||
BPUM_1949        301 AAGTTGATAAGGAAACGTCAATCAAACTGGTAG    333


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