Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00522 and BPUM_1948
See
Amino acid alignment /
Visit
BSNT_00522 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:20
# Commandline: needle
# -asequence dna-align/BSNT_00522.1.24716.seq
# -bsequence dna-align/BPUM_1948.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00522-BPUM_1948.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00522-BPUM_1948.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: BPUM_1948
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity: 713/804 (88.7%)
# Similarity: 713/804 (88.7%)
# Gaps: 6/804 ( 0.7%)
# Score: 3203.0
#
#
#=======================================
BSNT_00522 1 ATGACCGTGCAGGATATCTGTATTCATTTAGGTATCTCTCGCTCGTCTTA 50
|||||.||.|||||.||||||.|.|||||||||||||..||..|.||.||
BPUM_1948 1 ATGACGGTACAGGACATCTGTGTCCATTTAGGTATCTTACGTACTTCGTA 50
BSNT_00522 51 TTATCGTTGGAAGAAGAATCTGA---AGAAAGATCATCCCAAGCGCCATT 97
||||.|.|||||.|||.||.||| ||| .||||.|.||..|.||..
BPUM_1948 51 TTATAGATGGAAAAAGGATTTGACTCAGA---CTCATTCTAAAAGACAAC 97
BSNT_00522 98 TAGAAAAACAAATCGGCACGTTGTGCCGAGAGCACCAGTATCGATATGGA 147
||||.|||||..|||||||||||||||||.|||||.|.|||||||||||.
BPUM_1948 98 TAGAGAAACAGGTCGGCACGTTGTGCCGAAAGCACAAATATCGATATGGT 147
BSNT_00522 148 TATCGAAAAATCACAGCTATATTAAAAAAGAGAATGTGTATTAACCATAA 197
|||||.|||||||||||.|||.||||||.|||||||.|||||||||||||
BPUM_1948 148 TATCGGAAAATCACAGCCATACTAAAAATGAGAATGCGTATTAACCATAA 197
BSNT_00522 198 AACGGTTCAGCGTATTATGCAGAAAAATCAGTGGCAGTGCCGGGTTAAGG 247
|||.|||||.|||||.|||||||||||.||||||||.|||||||||||..
BPUM_1948 198 AACTGTTCAACGTATCATGCAGAAAAACCAGTGGCAATGCCGGGTTAAAA 247
BSNT_00522 248 TGAAAAAGCGCAAGAAGAATGGGCAGCCATATGCCGTGGTCGACAATATA 297
||||||||||.|||||||||||||||||.||||||||.|.||..||||||
BPUM_1948 248 TGAAAAAGCGTAAGAAGAATGGGCAGCCTTATGCCGTAGCCGGTAATATA 297
BSNT_00522 298 TTAGATAGGAACTTTCAGTCTGATCATCCTCTTGAAAAACTAGTAACAGA 347
.|.|||.||||.|||||||||||||..||||||||||||.|||||||.||
BPUM_1948 298 CTGGATCGGAATTTTCAGTCTGATCGCCCTCTTGAAAAATTAGTAACGGA 347
BSNT_00522 348 CATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTTCCAGTATAT 397
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1948 348 CATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTTCCAGTATAT 397
BSNT_00522 398 TGGATGTATATAATGGAGAAGTGATTGCTTTTACGATTGGAGATAAGCAG 447
|||||.||||||||||||||||||||||||||||||||||.|||||||||
BPUM_1948 398 TGGATTTATATAATGGAGAAGTGATTGCTTTTACGATTGGTGATAAGCAG 447
BSNT_00522 448 GACACAGACCTTGTCTTACACACACTTGATCAACTGCCAACACTGCCTGA 497
|||||||||.||.|||||.||||||||.||||.||.|||.||||||||||
BPUM_1948 448 GACACAGACTTTATCTTAAACACACTTAATCAGCTCCCAGCACTGCCTGA 497
BSNT_00522 498 GAACTGCGTGTTACATAGTGACCAAGGATCTGTGTATACATCTTACGAGT 547
|||.||||||||||||||.||.|||||.||||||||||||||||||||||
BPUM_1948 498 GAATTGCGTGTTACATAGCGATCAAGGTTCTGTGTATACATCTTACGAGT 547
BSNT_00522 548 ATCAGAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATGTCCCGCAAA 597
||||.|||||||||.|.|.|||||||||||||||||||||||||||.|||
BPUM_1948 548 ATCAAAAAGCTGTTCATATAAAAGGCATTACCATGAGCATGTCCCGTAAA 597
BSNT_00522 598 GGGACACCCGCTGATAATGCCTCCATCGAATCGTTTCATTCCTCACTAAA 647
|||||.||||||||||||||||||||||||||||||||||||||||||||
BPUM_1948 598 GGGACGCCCGCTGATAATGCCTCCATCGAATCGTTTCATTCCTCACTAAA 647
BSNT_00522 648 GTCTGAAACGTTCTATCTTAACAGCATTGATCGAACCACGACCGCCATCG 697
||||||||||||||||||||||||.||||||||.||.||||||.||||||
BPUM_1948 648 GTCTGAAACGTTCTATCTTAACAGGATTGATCGTACTACGACCACCATCG 697
BSNT_00522 698 TAGAACGCACTGTCATAGAATACATTCATTATTATAACAATATTCGTATT 747
|||||||||||||||.||||||||||.|||||||||||||.|||||||||
BPUM_1948 698 TAGAACGCACTGTCAAAGAATACATTTATTATTATAACAACATTCGTATT 747
BSNT_00522 748 CAAACGAAACTAAACAACCAATCACCGATAAATTATCGGCAATTGGCTGT 797
||||||||||||||||||||||||||||||||.|||||||||||||||||
BPUM_1948 748 CAAACGAAACTAAACAACCAATCACCGATAAACTATCGGCAATTGGCTGT 797
BSNT_00522 798 TTAA 801
.|||
BPUM_1948 798 ATAA 801
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.