Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03257 and BPUM_1921
See
Amino acid alignment /
Visit
BSNT_03257 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_03257___yphP.1.24716.seq
# -bsequence dna-align/BPUM_1921___yphP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03257___yphP-BPUM_1921___yphP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03257___yphP-BPUM_1921___yphP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: BPUM_1921___yphP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 326/443 (73.6%)
# Similarity: 326/443 (73.6%)
# Gaps: 16/443 ( 3.6%)
# Score: 1161.0
#
#
#=======================================
BSNT_03257___ 1 ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCG 50
|||||||||||.|||||||||||.|||||||||||.||.||.||.|||||
BPUM_1921___y 1 ATGTCAATGGCATATGAAGAATATATGCGCCAGCTCGTTGTGCCAATGCG 50
BSNT_03257___ 51 CCGCGAGCTGACTGGAGCAGGTTTTGAAGAGTTAACAACAGCGGAAGAAG 100
||..||||||||..|.|||||.||..||||..|.||.||.|..|||||||
BPUM_1921___y 51 CCAAGAGCTGACAAGTGCAGGATTCCAAGAACTGACGACGGAAGAAGAAG 100
BSNT_03257___ 101 TAGA--AAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGTTA 148
|||| |||| .|||.||.|.||.||.||.|||||..||||.||.||.|
BPUM_1921___y 101 TAGAACAAAC--GATGCAAGAAGCTGAAGGAACAACATTTGTTGTTGTAA 148
BSNT_03257___ 149 ACTCTGTATGCGGCTGTGCGGCAGGCCTTGCGCGTCCTGCGGCTACACAG 198
|.|||||||||||||||||||||||..|.||.||.|||||.||.||.||.
BPUM_1921___y 149 ATTCTGTATGCGGCTGTGCGGCAGGATTAGCACGCCCTGCAGCGACTCAA 198
BSNT_03257___ 199 GCAGTCCT----CCAGAATGACAAAACACCTGACAATACGGTGACTGTTT 244
||.||..| .||||| |||.|.||.|||||.|..||.||.||.|
BPUM_1921___y 199 GCTGTGATGAAGGCAGAA----AAAGCGCCAGACAAAATTGTCACAGTAT 244
BSNT_03257___ 245 TTGCGGGCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACT 294
|.||.||.||.||...|||||||||.||.||||||.|.||.|||||.|||
BPUM_1921___y 245 TCGCTGGGCAGGACCGAGAAGCTACGGCAAAAATGAGAGAATATTTCACT 294
BSNT_03257___ 295 GGCCAGGAGCCTTCTTCACCATCAATGGCTCTTTTGAAAGGCAAAGAAGT 344
||..|.|||||.||.||.||.||.|||||.|||||.|||||.||.||..|
BPUM_1921___y 295 GGTGAAGAGCCATCATCTCCTTCTATGGCCCTTTTAAAAGGAAATGAGCT 344
BSNT_03257___ 345 CGTACATTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAA 394
|||.||||||||.||||||.|.|||||||||||.||.||.||||||||.|
BPUM_1921___y 345 CGTTCATTTTATCCCGCGTGACGAAATTGAAGGTCATGAAATGGAAGATA 394
BSNT_03257___ 395 TTATGAGAAATCTGACT--GCTGCCTTCGATGCGCACTGCTAA 435
|.||||.||| ||.|| .||||.|||||....||.||||||
BPUM_1921___y 395 TCATGAAAAA--TGTCTTAACTGCATTCGAAAAACATTGCTAA 435
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.