Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03252 and BPUM_1915

See Amino acid alignment / Visit BSNT_03252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence dna-align/BSNT_03252___dfrA.1.24716.seq
#    -bsequence dna-align/BPUM_1915___dfrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03252___dfrA-BPUM_1915___dfrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03252___dfrA-BPUM_1915___dfrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03252___dfrA
# 2: BPUM_1915___dfrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity:     330/537 (61.5%)
# Similarity:   330/537 (61.5%)
# Gaps:          81/537 (15.1%)
# Score: 971.0
# 
#
#=======================================

BSNT_03252___      1 ATGATTTCATTCATTTTTGCGATGGATGCCA-------ACAGGCTTATCG     43
                     ||||||||..|.|||.|.||||       ||       ||||..|.||.|
BPUM_1915___d      1 ATGATTTCGATGATTGTGGCGA-------CAGGAAAAGACAGAGTCATTG     43

BSNT_03252___     44 GCAAAGACAATGATTTGCCGTGGCATTTGCCCAATGATCTTGCATACTTT     93
                     |..||||.|||.|..||||.||||||||.||...||||.|.|||||.|||
BPUM_1915___d     44 GTCAAGATAATCAAATGCCTTGGCATTTACCAGCTGATTTAGCATATTTT     93

BSNT_03252___     94 AAGAAAGTAACATCGGGCCATTCAATCATTATGGGCCGAAAAACATTTGA    143
                     |||||.||.|||...||||||.|.||..|.||||||.|||||||.|.|||
BPUM_1915___d     94 AAGAAGGTCACAGGTGGCCATACGATTGTCATGGGCAGAAAAACGTATGA    143

BSNT_03252___    144 ATCGATCGGACGTCCGCTTCCAAATCGGAAAAATATTGTCGTTACCTCAG    193
                     |||.||.|||||..||||.||.||.||....|||||.||..|.||..||.
BPUM_1915___d    144 ATCCATTGGACGAGCGCTGCCTAACCGCCGTAATATCGTGCTCACAACAA    193

BSNT_03252___    194 CGCCGTCTT------CAGAATTTCCGGGATGCACGGTTGTCGGTT-CATT    236
                     ...|.||||      |||||      ||||||..|||||||..|| ||||
BPUM_1915___d    194 GTTCTTCTTTTGAAGCAGAA------GGATGCGAGGTTGTCCATTCCATT    237

BSNT_03252___    237 AAAG--GATGTACTGGACATTTGTTCAGGCCCTGA---AGAATGCTTTGT    281
                        |  |||.|..|||..|||.|...|||   |||   |||||..|||.|
BPUM_1915___d    238 ---GCCGATATTTTGGCAATTGGAAAAGG---TGAGACAGAATTATTTAT    281

BSNT_03252___    282 GATCGGAGGGGCTCAGCTCTATACGGACCTTTTCCCTTATGCGGACAGAC    331
                     .||.||.|||.||.||||.|||...||..|..|.||.||||||||..|.|
BPUM_1915___d    282 CATTGGCGGGTCTAAGCTGTATGAAGAAATGATGCCATATGCGGATCGTC    331

BSNT_03252___    332 TGTATATGACGAAAATTCATCACGAGTTTGAGGGTGACCGTCACTTCCCT    381
                     |.|||||.|||.|.||.|||||.|.||||||.||.|||||..||||.|||
BPUM_1915___d    332 TATATATCACGCATATCCATCATGCGTTTGAAGGAGACCGCTACTTTCCT    381

BSNT_03252___    382 AAATTTGATGAATCCAATTGGAAGCTGGTTTCTTCTGAGCAGGGGATCAA    431
                     .|.|..||||||..|||.||||  |||.|.|      |.||.|.||  ||
BPUM_1915___d    382 CATTACGATGAAAACAAATGGA--CTGTTGT------ATCACGCGA--AA    421

BSNT_03252___    432 A----------GACGAAAAAAACCCGTATGATTACGAATTTCTAATGTAT    471
                     |          ||||||||.|||||.||..||||.||||||.|..|.|||
BPUM_1915___d    422 AAGGCCATCGCGACGAAAAGAACCCCTACAATTATGAATTTGTCGTTTAT    471

BSNT_03252___    472 GA-AAAAAAGAATTCTTCTAAAGCGGGAGGATTTTAA    507
                     || |||||||.|      |||                
BPUM_1915___d    472 GACAAAAAAGGA------TAA----------------    486


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