Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03211 and BPUM_1890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_03211___yozE.1.24716.seq
# -bsequence dna-align/BPUM_1890___yozE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03211___yozE-BPUM_1890___yozE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03211___yozE-BPUM_1890___yozE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03211___yozE
# 2: BPUM_1890___yozE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity: 162/237 (68.4%)
# Similarity: 162/237 (68.4%)
# Gaps: 24/237 (10.1%)
# Score: 521.0
#
#
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BSNT_03211___ 1 ATGAAATCCTTTTATCACTATTTATTGAAATACAGACACCCTAAGCCGAA 50
.||||.||.|||||.||.||||||.||||.||||||||.||.||.|||||
BPUM_1890___y 1 GTGAAGTCGTTTTACCATTATTTAATGAAGTACAGACATCCAAAACCGAA 50
BSNT_03211___ 51 GGACAGCATCAGTGAATTTGCCAATCAGGCGTATGAGGATCACAGCTTTC 100
.||....|||||..|.|||||.|||...||.|||||||||||||||||.|
BPUM_1890___y 51 AGATGAAATCAGCCATTTTGCAAATGCTGCTTATGAGGATCACAGCTTCC 100
BSNT_03211___ 101 CAAAAACATCTACCGATTATCATGAAATCAGT---TCATATTTGGAGCTG 147
|.|||.|.||.||.|||||||||| |.|.|| || ||||||||..|.
BPUM_1890___y 101 CGAAAGCGTCCACTGATTATCATG--AGCTGTCTGTC-TATTTGGAATTA 147
BSNT_03211___ 148 AATGCTGATTACCTTCA--CACGATGGCGACGTTTGATGAAGCTTGGGAT 195
||||..||||| ||.| |.|.|||.|.||.|||||.|||||.|..||.
BPUM_1890___y 148 AATGGCGATTA--TTTAAGCTCAATGACAACATTTGACGAAGCGTTTGAG 195
BSNT_03211___ 196 CAATACGA-GTCTGAAGTGCACGGCAGATAA------ 225
|||||.|| || .||||| ||.|.||
BPUM_1890___y 196 CAATATGATGT-AGAAGT------CAAAAAAAAATAA 225
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