Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03117 and BPUM_1849
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_03117___yozB.1.24716.seq
# -bsequence dna-align/BPUM_1849___yozB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03117___yozB-BPUM_1849___yozB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03117___yozB-BPUM_1849___yozB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03117___yozB
# 2: BPUM_1849___yozB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 409/549 (74.5%)
# Similarity: 409/549 (74.5%)
# Gaps: 21/549 ( 3.8%)
# Score: 1454.0
#
#
#=======================================
BSNT_03117___ 1 ATGAACCA-AACAGAA--AATAAACCGAAAAATTACACGGGGATTGTCCT 47
||||| | ||||||| || |||||||||||||..||.||.|||||..|
BPUM_1849___y 1 ATGAA--AGAACAGAATCAA-AAACCGAAAAATTTTACTGGTATTGTGAT 47
BSNT_03117___ 48 TACGCTGACAGTTCTGATTAACGGTTTAATCGCAGTGCTGTTTTTTATGC 97
.|...|.|||.||...||.|||||.||||||||..|..|.|||||.||||
BPUM_1849___y 48 CATTTTAACAATTGCCATAAACGGATTAATCGCTTTATTATTTTTAATGC 97
BSNT_03117___ 98 CTAAATTAGATCAGTTCAGCCATGCGAATATTCACA-TTTTGCCAATGCT 146
|.||||.||||.|.||.||.|||..|.||||| ||| |||||||..|.||
BPUM_1849___y 98 CAAAATCAGATAAATTTAGTCATCTGGATATT-ACATTTTTGCCGTTACT 146
BSNT_03117___ 147 GAATGCGATATTCAACAGCTTTACGTTTATCTTCTTATTGGCCGCGCTGA 196
.|||||..|..|.||||||||||||||||||||.|||.|..|.||.||.|
BPUM_1849___y 147 AAATGCCGTGATGAACAGCTTTACGTTTATCTTTTTACTTTCAGCACTCA 196
BSNT_03117___ 197 TTATGATTAAACAGAAAAATATCAAAGCTCACAAACGCTTTATTTTGGCC 246
|.|||||||||||.||.||.||.|||||.||.|.|||.|||||.||.||.
BPUM_1849___y 197 TCATGATTAAACAAAAGAACATTAAAGCGCATAGACGATTTATCTTTGCT 246
BSNT_03117___ 247 GCGTTCACAACAACATTACTATTTTTGATTTGCTATGTGACGTACCACTC 296
||.||..||||||||.|..|.|||||.||||..||||||||.||.||.||
BPUM_1849___y 247 GCATTTTCAACAACACTGGTCTTTTTAATTTCGTATGTGACCTATCATTC 296
BSNT_03117___ 297 GATTGCGGAAAACACGCTCTATGGCGGAGAAGGTATTATGCGCCCGATTT 346
.||.||.|...|.||.|..|..||.||||||||.||.||.||.||.||||
BPUM_1849___y 297 AATGGCAGCTGATACCCATTTCGGAGGAGAAGGGATCATCCGTCCAATTT 346
BSNT_03117___ 347 ATTTCTTTATTTTAATTACACATATCTGCCTT-TCTGCAATTATTGTGCC 395
|.||||||||||||||.||||||||| |.||| ||.|||.|.|||||.||
BPUM_1849___y 347 ACTTCTTTATTTTAATCACACATATC-GTCTTATCAGCAGTCATTGTACC 395
BSNT_03117___ 396 GCTTGCGCTGTTTACGCTGATCAGAGGCTTCAGC----ATGCAGGTGGAG 441
||||||.|||.|||||||..|.|||||| || |||||.||.|||
BPUM_1849___y 396 GCTTGCCCTGATTACGCTATTTAGAGGC----GCACAGATGCAAGTCGAG 441
BSNT_03117___ 442 CGCCACAAAAAAATTGCGAGATGGACAATGCCTCTATGGCTGTATGTAAG 491
||||||...||||||||..|.|||||||||||.||||||||.|||||.||
BPUM_1849___y 442 CGCCACCGTAAAATTGCTCGCTGGACAATGCCGCTATGGCTTTATGTCAG 491
BSNT_03117___ 492 CCTTACAGGCGTTATTGTATATTTGATGATTTCACCGTATTA---CTAA 537
||||||.|||||.|||||||||.||||||||||.||.||||| ||||
BPUM_1849___y 492 CCTTACTGGCGTCATTGTATATATGATGATTTCTCCATATTACAGCTAA 540
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