Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03038 and BPUM_1807
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_03038___dacC.1.24716.seq
# -bsequence dna-align/BPUM_1807___dacC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03038___dacC-BPUM_1807___dacC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03038___dacC-BPUM_1807___dacC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03038___dacC
# 2: BPUM_1807___dacC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1664
# Identity: 953/1664 (57.3%)
# Similarity: 953/1664 (57.3%)
# Gaps: 337/1664 (20.3%)
# Score: 2289.0
#
#
#=======================================
BSNT_03038___ 1 ATGATGAAGCGCAGAGAGGCGGGGAAATTAATGAAAAAAAGCAT-----A 45
.|| ||||.| |
BPUM_1807___d 1 ------------------------------GTG-----AAGCGTTTTTCA 15
BSNT_03038___ 46 AAGCTTTATGTTGCTGTTTTAC-----TGCTTTTCGTC-ATTGCTTCGGT 89
.||||.| ||| |||||| |||.||..||| |||
BPUM_1807___d 16 CAGCTCT-TGT-----TTTTACAAATATGCATTCTGTCGATT-------- 51
BSNT_03038___ 90 GCCTTATATGCATCAGGCT-GCGCTTGCCGCTGAAAAACAAGATGCACTT 138
||||.| || .||.||.|.|| ||||.|.|||..|||
BPUM_1807___d 52 ---TTATTT--------CTCCCGTTTTCAGC---AAAAGATGATCAACT- 86
BSNT_03038___ 139 TCCGGGCAGATCGATAA---------------GAT------TTTAGCTGA 167
|.|||.||| ||| ||| |||||.|||
BPUM_1807___d 87 ----GACAGCTCG-TAACGGCTCACTGTCGTGGATGACCACTTTAGATGA 131
BSNT_03038___ 168 --TCAT----------CCTGCCCTCGAAGGCGCAATGGCCGGCATCACCG 205
|.|| ||||...|.|||||||||||..|.|||||.|.||
BPUM_1807___d 132 ATTTATACGAAAAGCACCTGATTTAGAAGGCGCAATCTCAGGCATTAGCG 181
BSNT_03038___ 206 TTCGCTCTGCGGAAACAGGTG------CTGTTCTATATGAACATTCAGGA 249
|.|| .||.||...|| ||.||||.|||||||||..||..
BPUM_1807___d 182 TCCG------TGATACTTCTGACTCCTCTCTTCTTTATGAACATCAAGCC 225
BSNT_03038___ 250 GACACCCGAATGAGGCCTGCCTCTTCTCTAAAGCTTTTGACAGCGGCCGC 299
||.|..||..|.|..|||||.|||..|.|.||.||..|.|||.|.|||..
BPUM_1807___d 226 GATATTCGCCTTACTCCTGCTTCTAATATGAAACTGCTCACATCAGCCAT 275
BSNT_03038___ 300 GGCACTTTCTGTCCTTGGCGAGAAC-----TATTCTTTTACAACCGAGGT 344
.||.|||..|.|.|||||.|| ||| .|||| .|.||.||..|
BPUM_1807___d 276 CGCCCTTGATATACTTGGAGA-AACACACACATTC----CCTACAGACAT 320
BSNT_03038___ 345 CCGGACGGATGGAAC-ACTGAAAGGGAAAAAGCTGAATGGTAACCTTTAT 393
|.|||.|||||||.| |.|.||| .|||||.|.|..||||.|.|||.|||
BPUM_1807___d 321 CTGGATGGATGGATCTATTCAAA-AGAAAACGTTACATGGAAGCCTGTAT 369
BSNT_03038___ 394 TTGAAAGGGAAAGGCGATCCGACACTTTTACCATCTGATTTTGACA-AAA 442
.|....||.|..||.||||||||..|.|||..|...||||||| || .|.
BPUM_1807___d 370 CTACGCGGTACCGGAGATCCGACTTTATTAGAAGAGGATTTTG-CAGCAC 418
BSNT_03038___ 443 TGGCTGAGAAATTGAAAAATTCCGGCGTAAAAGTA--ATTAAAGGCAATC 490
|.||..|..||.|||||||..||||..||.| || |||...||..|.|
BPUM_1807___d 419 TTGCCAAACAAGTGAAAAAGGCCGGAATACA--TACGATTCGCGGACAGC 466
BSNT_03038___ 491 TGAT-CGG-TGATGATACGTGGCATGATGAC-------ATGCGATTATCA 531
| | ||| .||.|||||.|||.|||||||| ||.||||
BPUM_1807___d 467 T--TGCGGCAGACGATACATGGTATGATGACACAAGATATTCGAT----- 509
BSNT_03038___ 532 CCTGATATGCCTTGGAGCGATGA--ATACACATATTATGGCGCGCCAATC 579
||||.|.||||||||.||||| || || ||||||.||.||.|.||||
BPUM_1807___d 510 --TGATTTACCTTGGAGTGATGAGGAT-CA-ATATTACGGTGCACAAATC 555
BSNT_03038___ 580 TCCGCTCTAACAGCGTCTCCGAATGAAGACTATGATGCAGGCACTGTGAT 629
||.|||||.||.||.||.||||||.||||.||||||||.||.||.|||||
BPUM_1807___d 556 TCTGCTCTCACCGCTTCACCGAATCAAGATTATGATGCCGGAACAGTGAT 605
BSNT_03038___ 630 TGTTGAGGTCACCCCAAATCAAAAA-GAAGGGGAA-----GAGCC--TGC 671
|.||||..|.|..|| |..|||||| |.||||.|| || || ||.
BPUM_1807___d 606 TCTTGAAATAAAGCC-AGGCAAAAAGGCAGGGCAAAAAGCGA-CCTATGA 653
BSNT_03038___ 672 CGTG------------TCTGTCTCTCCGAAAACCGATTATATAACGATAA 709
|.|| ||||||.||| ||...||.| ||.|.| |||
BPUM_1807___d 654 CATGATTCCGAAGACTTCTGTCCCTC----AAGTCATCA-ATCAAG-TAA 697
BSNT_03038___ 710 AGAACGATGCTGAAACGACTGCTGCCGGTTCAGAGAAAGACCTCACAATC 759
|.|.||...|.||| |.||| ||.|||||
BPUM_1807___d 698 AAACCGTACCAGAA---------GGCGG----GAAAAAGA---------- 724
BSNT_03038___ 760 GAAA--------GAGAG----CATGGAACAAACACGATTACAATTGAAGG 797
||| .||.| ||.|||||.||||.|||.|| .||||..|
BPUM_1807___d 725 -AAATTTCTTTTAAGCGTTCTCACGGAACCAACAAGATCAC-TTTGACTG 772
BSNT_03038___ 798 GAGCGTA--CCGGTTGACTCAAACAAG----ACAAAGGAATGGATTTCTG 841
||.| || |||| ||| ||.|.|| .|.|.|.|||||.|..|..
BPUM_1807___d 773 GAAC-TATTCCGG-TGA---AAGCGAGTGTATCTAGGCAATGGGTAGCGT 817
BSNT_03038___ 842 TCTGGGAGCCTGCCGGATATGCCTTAGATTTATTTAAGC-AGTCACTAAA 890
|.|||||.||..||...|||||.|||||||||.|.||.| || |..||||
BPUM_1807___d 818 TATGGGAACCAACCTCTTATGCGTTAGATTTAATGAAACGAG-CGTTAAA 866
BSNT_03038___ 891 AAAACAAGGTATTACTGTGAAAGGGGACATCAAGACGGGTGAAGCAC--- 937
.....||||.|||...|| ||||| |||.|.|||| .||
BPUM_1807___d 867 GGCGGAAGGGATTCAAGT-AAAGG---------GACCGCTGAA-AACAAA 905
BSNT_03038___ 938 -CTAGTTCTTCA------GATG-----TGCTGCTCTCTCATCGCTCAATG 975
|.|||||.|.| ||.| ||| |.|.|||...||.|||
BPUM_1807___d 906 ACAAGTTCCTAAAAAAGCGAAGAAAATTGC----CACCCATTCATCTATG 951
BSNT_03038___ 976 CCTTTATCGAAACTTTTTGTGCCGTTCATGAAATTAAGTAATAACGGACA 1025
||||||||..|.|||.||||.||..|.||||||.|.||.||.||....||
BPUM_1807___d 952 CCTTTATCAGAGCTTCTTGTTCCCATGATGAAACTCAGCAACAATACCCA 1001
BSNT_03038___ 1026 TGCCGAAGTGCTCGTAAAAGAGATGGG---GAAAGTGAA-AAAAGGAGAA 1071
|||.|||||..|..||||.|||.|.|| ||||||||| ||.| ||
BPUM_1807___d 1002 TGCAGAAGTTTTGCTAAAGGAGCTAGGCAAGAAAGTGAAGAACA----AA 1047
BSNT_03038___ 1072 GGGAGCTGGGAAAAGGGGCTCGAAGTGT------TAAACAGTACACTTCC 1115
|||||||..|||...||.||.|| ||| |.|||.| |||||
BPUM_1807___d 1048 GGGAGCTTTGAAGCTGGACTAGA--TGTCATGAATGAACGG----CTTCC 1091
BSNT_03038___ 1116 AAAATTTGGTGTTGATTCTAAATCACT---CGTCTTAAGGGACGGATCAG 1162
....|||||..|.|||||| ||.|| .||.||..|.||.||.||||
BPUM_1807___d 1092 TGCCTTTGGCATCGATTCT---TCTCTTACAGTTTTGCGAGATGGGTCAG 1138
BSNT_03038___ 1163 GAATCTCACATATTGATGCTGTATCCTCAGATCAACTTTCACAGCTGTTA 1212
|.||.||||.||||.|...|||.||..|..|||| .|||||| |||
BPUM_1807___d 1139 GCATATCACCTATTAACCTTGTTTCTGCCAATCA--GTTCACA----TTA 1182
BSNT_03038___ 1213 TAT------GACATTC---AGGATCAGAGTTGGTTCTCGGCTTATCTAAA 1253
|.| .|.|||| ||||..|| |||||...|.|.|.|..|.|
BPUM_1807___d 1183 TTTTTAGCAAATATTCAAAAGGAAAAG---TGGTTTAAGACCTTTGAACA 1229
BSNT_03038___ 1254 TTCATTACCTGTT-GC--GGGCAACCCTGACAGAATGGTGGGCGGAACGC 1300
|.|..|.|| ||| || |||||| .|||..|||||||.||.||.|||.
BPUM_1807___d 1230 TGCGCTTCC-GTTAGCAGGGGCAA--GTGAACGAATGGTCGGAGGGACGT 1276
BSNT_03038___ 1301 TGAGAAACCGCATGAAAGACACTCCTGCACAAGGAAAAGTAAGAGCAAAA 1350
|.||.|||.|..|.|||||..||.||.|||.||.|||||||.|.||||||
BPUM_1807___d 1277 TAAGGAACAGATTAAAAGAACCTGCTACACTAGAAAAAGTACGTGCAAAA 1326
BSNT_03038___ 1351 ACCGGATCGCTCAGTACGGTAAGCTCTCTATCGGGGTACGCAGAAACAAA 1400
||.||.||..|.|.|||.||.||..|.||.||.||.|||...||.|||||
BPUM_1807___d 1327 ACAGGCTCATTAACTACAGTCAGTACACTTTCTGGATACATTGACACAAA 1376
BSNT_03038___ 1401 GAGCGGAAAAAAACTTGTTTTCTCTATTCTTCTAAATGGA--TTGATTGA 1448
|||||||||.|.|.|.|.|||.||.|||.|..||||| .| ||| ||||
BPUM_1807___d 1377 GAGCGGAAAGACAATCGCTTTTTCCATTTTATTAAAT-CATCTTG-TTGA 1424
BSNT_03038___ 1449 TGAAGAGGATGGAAAAGATATTGAGGATCAAATCGCTGT---CATTTTGG 1495
|||.||..|.||.|||||.||.||.||.||.|| ||| ||||||.|
BPUM_1807___d 1425 TGACGAAAAGGGGAAAGAGATAGAAGACCACAT---TGTCAGCATTTTAG 1471
BSNT_03038___ 1496 C---AAATCAATAA 1506
| .||||..||.
BPUM_1807___d 1472 CTGAGAATCTTTAG 1485
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