Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02995 and BPUM_1711

See Amino acid alignment / Visit BSNT_02995 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence dna-align/BSNT_02995.1.24716.seq
#    -bsequence dna-align/BPUM_1711.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02995-BPUM_1711.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02995-BPUM_1711.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02995
# 2: BPUM_1711
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      86/127 (67.7%)
# Similarity:    86/127 (67.7%)
# Gaps:           2/127 ( 1.6%)
# Score: 254.0
# 
#
#=======================================

BSNT_02995         1 ATGTTGTTTATCTTAAGAATGGTGATTTTAGGCTTATTCTCTTTCACAGC     50
                     |||||.|||.||||||||.|..|.|||.||||..||||||||.||||..|
BPUM_1711          1 ATGTTATTTTTCTTAAGAGTATTCATTCTAGGTCTATTCTCTGTCACTTC     50

BSNT_02995        51 GCTAAATTTATTTGTATGGCAGGGAATTGAAGTCATTCATGCGGTAACAG    100
                     .||...|.|.||.||.|..||.|||||||||||..|.||.||..|.||| 
BPUM_1711         51 ACTTTCTCTTTTCGTTTACCAAGGAATTGAAGTAGTGCACGCCATTACA-     99

BSNT_02995       101 ATC-TATTCACCAACCATGAAAGCTGA    126
                     |.| |.||...|||.||.||.||||.|
BPUM_1711        100 AGCATGTTTGGCAATCACGAGAGCTAA    126


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