Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02993 and BPUM_1709
See
Amino acid alignment /
Visit
BSNT_02993 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_02993___parE.1.24716.seq
# -bsequence dna-align/BPUM_1709___parE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02993___parE-BPUM_1709___parE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02993___parE-BPUM_1709___parE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02993___parE
# 2: BPUM_1709___parE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1982
# Identity: 1561/1982 (78.8%)
# Similarity: 1561/1982 (78.8%)
# Gaps: 28/1982 ( 1.4%)
# Score: 6086.0
#
#
#=======================================
BSNT_02993___ 1 TTGGCTAGAAAACAGCAATTTGATTACAACGAAGATGCCATACAGGTGCT 50
||||.||.|||.||||||.|.|||||.|||||.|||.|.||.||||||||
BPUM_1709___p 1 TTGGTTAAAAAGCAGCAAGTAGATTATAACGATGATTCTATTCAGGTGCT 50
BSNT_02993___ 51 CGAAGGCCTTGAGGCTGTCAGGAAAAGGCCGGGTATGTATATTGGCTCTA 100
.||.||.|||||.||.|||.|.|||.|.|||||.|||||||||||.||.|
BPUM_1709___p 51 AGAGGGACTTGAAGCGGTCCGTAAACGTCCGGGAATGTATATTGGGTCAA 100
BSNT_02993___ 101 CTGACGCGCGGGGTTTGCACCACTTGGTTTATGAAATTGTAGATAACTCT 150
|.||..|.||.|||.|.||.|||.|.||.|||||.||||||||.||||||
BPUM_1709___p 101 CGGATTCACGCGGTCTTCATCACCTTGTCTATGAGATTGTAGACAACTCT 150
BSNT_02993___ 151 GTCGACGAGGTGCTTGCCGGCCATGGAGATCACATAATCGTCAAAATACA 200
|||||.||.||.||.||.||||||||||||||.||..|.|||||||||||
BPUM_1709___p 151 GTCGATGAAGTACTCGCTGGCCATGGAGATCATATCGTTGTCAAAATACA 200
BSNT_02993___ 201 TAAAGACAATAGTATTTCTGTACAGGATAGAGGCCGCGGCATGCCGACCG 250
||||||.||.||.|||||.||.|||||||.|||.||.||.|||||.||.|
BPUM_1709___p 201 TAAAGATAACAGCATTTCCGTCCAGGATAAAGGACGTGGAATGCCTACTG 250
BSNT_02993___ 251 GAATGCATAAGCTCGGCAAACCAACCCCTGAAGTGATTTTAACGGTGCTT 300
|.|||||||||||.||.|||||.||.||.||..|.|||||||||||.|||
BPUM_1709___p 251 GTATGCATAAGCTTGGAAAACCGACACCCGAGATCATTTTAACGGTCCTT 300
BSNT_02993___ 301 CATGCCGGAGGAAAATTCGGCCAAGGCGGCTATAAGACAAGCGGCGGGCT 350
||.||.||.||||||||.||.|||||.||.|||||.|||||.||.|||||
BPUM_1709___p 301 CACGCAGGCGGAAAATTTGGTCAAGGTGGATATAAAACAAGTGGTGGGCT 350
BSNT_02993___ 351 CCACGGAGTTGGTGCATCAGTCGTGAATGCTTTATCTGAATGGCTGACGG 400
.|||||||||||.||.||.||.||.||.||..|.||.||.|||||.||.|
BPUM_1709___p 351 TCACGGAGTTGGGGCGTCTGTTGTAAACGCGCTGTCAGAGTGGCTTACTG 400
BSNT_02993___ 401 TTACCATTGAGCGGGACGGTTTTGTCTATCAGCAGCGATTTGAAAATGGA 450
|.||.|||||.||.||.||.|.|.|||||||.|||||.|||||||||||.
BPUM_1709___p 401 TCACAATTGAACGTGATGGCTATATCTATCATCAGCGGTTTGAAAATGGC 450
BSNT_02993___ 451 GGAAAACCGGTTACATCTCTCGAAAAGATTGGCAAAACAAAAAAGACGGG 500
||||||||.||.||.||.||.|||||..|.||.|||||.|||||.||.||
BPUM_1709___p 451 GGAAAACCCGTAACGTCACTTGAAAAAGTCGGAAAAACGAAAAAAACCGG 500
BSNT_02993___ 501 AACTCTTACACACTTTAAGCCAGATCCAACGATGTTCAG---CACAACCA 547
|||.||.|..||.|||||.|||||||.|.|.|||||||| |||||||
BPUM_1709___p 501 AACACTGATTCATTTTAAACCAGATCGATCCATGTTCAGTGTCACAACC- 549
BSNT_02993___ 548 CTTATAATTTTGAAACGCTCTCTGAGCGCTTAAGAGAGTCTGCGTTTTTG 597
||||||||.||.|||.|.||.||.||.||||||||.|||||.|||||.
BPUM_1709___p 550 --TATAATTTCGATACGTTATCAGAACGTTTAAGAGAATCTGCCTTTTTA 597
BSNT_02993___ 598 TTAAAAGGATTGAAAATTGAGCTGATTGATGAACGCAATGACCAGCATGA 647
|||||||||||.|||||.|||||||||||||||||..||||....||.||
BPUM_1709___p 598 TTAAAAGGATTAAAAATAGAGCTGATTGATGAACGACATGATGTACAAGA 647
BSNT_02993___ 648 GGTCTTTTATTATGAAAACGGCATAGAAGCGTTTGTTGCTTATTTAAATG 697
...||||||||||||||..|||||.|||||.||.||||||||||||||||
BPUM_1709___p 648 AACCTTTTATTATGAAACAGGCATTGAAGCCTTCGTTGCTTATTTAAATG 697
BSNT_02993___ 698 AAGAAAAAGACGTCTTGTCTGAAGTGGTCTCGTTTGAGGGTGAGCATCAT 747
||||||||||.||..||..||||||||||||.|||||.||.||||||||.
BPUM_1709___p 698 AAGAAAAAGATGTTCTGAGTGAAGTGGTCTCATTTGAAGGAGAGCATCAA 747
BSNT_02993___ 748 TCTATAGAAGTGGACTTTGCGTTCCAGTTTAACGATGGTTATTCTGAAAA 797
||.||.|||||.||.|||||.||.||.||.||.|||||.||.||.|||||
BPUM_1709___p 748 TCCATTGAAGTAGATTTTGCATTTCAATTCAATGATGGCTACTCGGAAAA 797
BSNT_02993___ 798 TATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACACATG 847
||||.|.||.||.|||||.||.||.|||||||||||.|||||.|||||||
BPUM_1709___p 798 TATTCTTTCTTTCGTCAATAACGTGAGAACAAAAGATGGCGGTACACATG 847
BSNT_02993___ 848 AGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGCGCGA 897
||||.|||||.|||||.||.||||||.|.||.|||||||||||||||||.
BPUM_1709___p 848 AGTCTGGTGCTAAAACGGCAATGACGAGAGCCTTTAATGAATATGCGCGC 897
BSNT_02993___ 898 AAAGTGG--CTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCACCGAT 945
|||||.| |||| |.||||||||.||.||||||.|.||.|||||.|||
BPUM_1709___p 898 AAAGTCGCCCTTT--TAAAAGAAAAAGACAAGAACTTAGAGGGCACTGAT 945
BSNT_02993___ 946 ATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCATACCTGAGGAGCT 995
||..|.||.|||||.||.||.||||||||||||.|.||.|||||.||.||
BPUM_1709___p 946 ATTCGCGAGGGGCTGTCTGCTATTATTTCTGTCAGAATTCCTGAAGAACT 995
BSNT_02993___ 996 TCTTCAATTTGAGGGACAAACAAAAGGAAAGCTCGGTACCAGTGAAGCAA 1045
.|||||||||||.||.||.||||||||||||||.||.||.|||||.||..
BPUM_1709___p 996 GCTTCAATTTGAAGGTCAGACAAAAGGAAAGCTTGGGACAAGTGAGGCTC 1045
BSNT_02993___ 1046 GATCAGCGGTGGATGCGATTGTTTCAGAGCAGCTTGCTTACTTTTTAGAG 1095
|.|||||.||.|||||..||.||||.||..||||.|||||.||..|.||.
BPUM_1709___p 1046 GCTCAGCTGTTGATGCTGTTATTTCTGAAAAGCTAGCTTATTTCCTTGAA 1095
BSNT_02993___ 1096 GAAAATCGGGACACCGCAACGCTTCTTGTCAAAAAAGCAATCAAGGCG-A 1144
|||||.||.||.||.||.||.||||||||.|.||||||.||.||.||| |
BPUM_1709___p 1096 GAAAACCGTGAAACAGCGACTCTTCTTGTGAGAAAAGCGATTAAAGCGCA 1145
BSNT_02993___ 1145 GCCAGGCGCGCGAAGCGGCACGCAAAGCCCGTGAAGAAGCAAGAAGCGGC 1194
| |||||..|.|||||.||..|.|.|||.||||||||||||||.||||||
BPUM_1709___p 1146 G-CAGGCAAGAGAAGCTGCTAGAAGAGCACGTGAAGAAGCAAGGAGCGGC 1194
BSNT_02993___ 1195 AAAAAACGAAAAAAATCAGAAGCGACTTTAAGCGGAAAGCTGACGCCTGC 1244
||.|||||.||.||.||.|||||.||..|.||||||||..|.||.|||||
BPUM_1709___p 1195 AAGAAACGGAAGAAGTCCGAAGCAACCCTGAGCGGAAAATTAACACCTGC 1244
BSNT_02993___ 1245 GGGTTCA----AGAAACCCGGCAAAAAATGAATTGTATCTCGTTGAGGGA 1290
||| |||||||||||||.|||.||.|||||.||.||.||||||
BPUM_1709___p 1245 ----TCAATCTAGAAACCCGGCAAGAAACGAGTTGTACCTAGTAGAGGGA 1290
BSNT_02993___ 1291 GATTCAGCAGGCGGGTCAGCCAAGCAGGGACGAGACCGCAGATTCCAGGC 1340
||.|||||||||||||||||.||.||.|||||.|||||.|.||||||.||
BPUM_1709___p 1291 GACTCAGCAGGCGGGTCAGCAAAACAAGGACGTGACCGTAAATTCCAAGC 1340
BSNT_02993___ 1341 GGTTCTGCCTTTACGCGGTAAAGTCATTAATACAGAAAAAGCTAAGCTTG 1390
|||.|||||..|.||.||.||.||.|||||.|||||||||||.||.||||
BPUM_1709___p 1341 GGTGCTGCCGCTTCGTGGAAAGGTTATTAACACAGAAAAAGCGAAACTTG 1390
BSNT_02993___ 1391 CTGATATCTTTAAAAATGAAGAGATCAATACGATCATTCATGCGATCGGC 1440
|||||||.||.|||||||||||.|||||.||.||.||||||||||||||.
BPUM_1709___p 1391 CTGATATTTTCAAAAATGAAGAAATCAACACCATTATTCATGCGATCGGT 1440
BSNT_02993___ 1441 GGGGGAGTCGGGGCAGATTTCTCAA--TCGATGACATCAACTACGACAAA 1488
||.||.|||||.|..|||| |.|| |.||.||||||||.||.||||||
BPUM_1709___p 1441 GGAGGCGTCGGTGTCGATT--TTAATGTAGAAGACATCAATTATGACAAA 1488
BSNT_02993___ 1489 ATCATCATTATGACCGATGCCGATACTGACGGCGCCCATATTCAAGTGCT 1538
|||.|.||.|||||.|||||.|||||.||.||.||.||||||||||||||
BPUM_1709___p 1489 ATCGTGATCATGACAGATGCTGATACAGATGGAGCGCATATTCAAGTGCT 1538
BSNT_02993___ 1539 GCTTCTTACCTTTTTCTATCGCTATATGAAACCGCTCATTGAGCATGGCA 1588
.||.||.||.||.|||||.|||||||||||.|||||.|||||||||||||
BPUM_1709___p 1539 TCTGCTCACGTTCTTCTACCGCTATATGAAGCCGCTGATTGAGCATGGCA 1588
BSNT_02993___ 1589 AGGTGTTCATTGCGCTGCCACCTTTATATAAGGTCAGTAAAGGAAGCGGG 1638
|||||||.|||||.||.||.|||||||||||.|||||.|||||....|||
BPUM_1709___p 1589 AGGTGTTTATTGCACTACCGCCTTTATATAAAGTCAGCAAAGGCTCAGGG 1638
BSNT_02993___ 1639 AAGAAGGAAATCATTGAATATGCATGGTCTGATGAAGAGATGGGTGATGT 1688
||.||.|||.|||||||.||.|||||||||||||||||.||||.|||.||
BPUM_1709___p 1639 AAAAAAGAAGTCATTGAGTACGCATGGTCTGATGAAGAAATGGATGACGT 1688
BSNT_02993___ 1689 CCTGAAAAAAGTCGGCAAAGGCTATACCATTCAACGATATAAGGGTCTTG 1738
.|||||.|||||.||.|||||.||.||.|||||.||.|||||.|||.|.|
BPUM_1709___p 1689 ACTGAAGAAAGTTGGAAAAGGGTACACGATTCAGCGCTATAAAGGTTTAG 1738
BSNT_02993___ 1739 GAGAGATGAACGCAGACCAGTTGTGGGAAACGACGATGAATCCGGAGTCC 1788
|.||.||||||||.||||||.|.|||||||||||.||||||||.||.||.
BPUM_1709___p 1739 GTGAAATGAACGCCGACCAGCTATGGGAAACGACAATGAATCCAGAATCG 1788
BSNT_02993___ 1789 CGCACACTTGTTAGGGTCAAAATTGACGATGCGGCACGTGTAGAAAGACG 1838
.|.||||||||.||.||||||||.||||||||.|||||.||.|||.|.||
BPUM_1709___p 1789 AGAACACTTGTCAGAGTCAAAATCGACGATGCTGCACGAGTGGAACGCCG 1838
BSNT_02993___ 1839 TGTGACGACGTTAATGGGAGACAAAGTAGAGCCGCGCAGAAAGTGGATTG 1888
.||.|||||.||||||||.|||||||||||.||.||..|.||.|||||||
BPUM_1709___p 1839 CGTCACGACATTAATGGGTGACAAAGTAGAACCACGTCGTAAATGGATTG 1888
BSNT_02993___ 1889 AGAAAAACGTCGCTTTTGG-CTTAGATGAAGAAAGCAATA-TCTTAGAAA 1936
|.||.||.|||||.||||| ||| |||||.|||||.||.| |||| ||||
BPUM_1709___p 1889 AAAAGAATGTCGCCTTTGGACTT-GATGAGGAAAGTAACATTCTT-GAAA 1936
BSNT_02993___ 1937 ATGAAAACTTATCGGTCGCTGAGGAGGTTTAA 1968
||||||||||.|||.|.|||||||||||||||
BPUM_1709___p 1937 ATGAAAACTTGTCGCTAGCTGAGGAGGTTTAA 1968
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.