Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02991 and BPUM_1708
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_02991___yneT.1.24716.seq
# -bsequence dna-align/BPUM_1708___yneT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02991___yneT-BPUM_1708___yneT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02991___yneT-BPUM_1708___yneT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02991___yneT
# 2: BPUM_1708___yneT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 293/433 (67.7%)
# Similarity: 293/433 (67.7%)
# Gaps: 44/433 (10.2%)
# Score: 926.0
#
#
#=======================================
BSNT_02991___ 1 ATGCAAAATCCTTCTAAAGCGGAAATTAAAGAG-----ATTCTTCAAAGA 45
|||.|..|||||||.|||...|||||| | || ||.|||||
BPUM_1708___y 1 ATGAATCATCCTTCGAAACAAGAAATT-----GGTCGTAT--TTTAAAGA 43
BSNT_02991___ 46 --AGCAAACGTATAGCGGTAGTAGGGCTTTCAGACCGTCCGGATAGAACG 93
||.|||||.||.||.||.||.||..|.|||||.|..|||.|..|||||
BPUM_1708___y 44 GCAGTAAACGAATTGCTGTTGTTGGATTATCAGATCAGCCGCACCGAACG 93
BSNT_02991___ 94 TCACATATGGTTTCAAAAGCAATGCAGGACGCGGGTTATGAAATTATCCC 143
|||.|||||||.||.|||||.||||||||.||.||||||||.||.||.||
BPUM_1708___y 94 TCATATATGGTATCTAAAGCGATGCAGGATGCCGGTTATGAGATCATTCC 143
BSNT_02991___ 144 TGTGAACCCTACAATTGATGAGGCGCTAGGTATCAAAGCCGTTTCATCTT 193
.|||||.||.||.||.|||||.||.||.|||.|.|||||.||..|.||..
BPUM_1708___y 144 GGTGAATCCAACGATCGATGAAGCACTTGGTGTGAAAGCAGTCGCTTCAC 193
BSNT_02991___ 194 TAAAAGAGATAGACGGTCCGATTGACATCGTAAATGTATTCCGGCGATCA 243
||||||||||..|.|..||..||||.|||||.|||||.|||.|.||.|||
BPUM_1708___y 194 TAAAAGAGATCAAAGAGCCTGTTGATATCGTGAATGTTTTCAGACGTTCA 243
BSNT_02991___ 244 GAACAGCTT---CCTGGAGTGGCGGAAGAGTTTTTAGAGACAGATGCGCC 290
| ||.|| ||.|.||||||.|||||.|||.|.||.|..||.||.||
BPUM_1708___y 244 G---AGTTTTTGCCCGAAGTGGCAGAAGAATTTCTTGAAATCGACGCACC 290
BSNT_02991___ 291 AGTATTTTGGGCACAGCAAGG--GCTAGTTAATGAGGAAGC-ATACCAGA 337
.||.||||||||.|||||||| .||| |.|.||.||||| | |.|
BPUM_1708___y 291 TGTTTTTTGGGCGCAGCAAGGCATCTA--TCACGAAGAAGCGA----AAA 334
BSNT_02991___ 338 TGCTAA---AAGAAAAAGGCAGAACGGTT---ATCATGGATCTGTGCATA 381
.||||| |.|||||.||| |.|||| |||||||||.|.||.||.
BPUM_1708___y 335 GGCTAATTGAGGAAAATGGC---AAGGTTGCCATCATGGATTTATGTATC 381
BSNT_02991___ 382 AAAGTGGCACACGCTGTAACAAAA------TAG 408
||.|||||.||.||..|.|||||| ||.
BPUM_1708___y 382 AAGGTGGCTCATGCAATGACAAAAACTCATTAA 414
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