Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02982 and BPUM_1703

See Amino acid alignment / Visit BSNT_02982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_02982___tlp.1.24716.seq
#    -bsequence dna-align/BPUM_1703___tlp.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02982___tlp-BPUM_1703___tlp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02982___tlp-BPUM_1703___tlp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02982___tlp
# 2: BPUM_1703___tlp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     177/255 (69.4%)
# Similarity:   177/255 (69.4%)
# Gaps:          15/255 ( 5.9%)
# Score: 570.0
# 
#
#=======================================

BSNT_02982___      1 ATGACAAAGAACCAAAATCAATATCAGCAGCCTAATCCTGATGATCGTTC     50
                     |||  ||.||   |||.|| ||||||  |.|| |||||.|||||||||||
BPUM_1703___t      1 ATG--AATGA---AAAGTC-ATATCA--ATCC-AATCCAGATGATCGTTC     41

BSNT_02982___     51 TGACAATGTGGAAAAATTGCAGGATATGGTTCAAAATACAATTGAAAATA    100
                     |||.|||||.|||||..||||.||||||.|..||||.||..||||.||||
BPUM_1703___t     42 TGATAATGTTGAAAAGCTGCAAGATATGATCGAAAACACCCTTGACAATA     91

BSNT_02982___    101 TAGAAGAAGCAGAAGCATCAATGGAGTTTGCTTCAGGAGAAGATAAACAG    150
                     |.||.|||.|.||||||.|.||||...||.|..|||...||||.||||||
BPUM_1703___t     92 TCGATGAATCTGAAGCAGCGATGGCCCTTTCGACAGATCAAGAAAAACAG    141

BSNT_02982___    151 CGTATCAAAGAAAAAAATGCAAGGCGCGAACAGAGCATTGAAGCGTTTCG    200
                     ...|||||..|||||||||.||..||..||..|||||||||.||..|.||
BPUM_1703___t    142 ATGATCAAGCAAAAAAATGAAAATCGAAAAATGAGCATTGATGCTATGCG    191

BSNT_02982___    201 TAATGAAATACAGGACGAATCTGCAGCGAGACAAAACGGATACCGTTCTT    250
                     |...||.||..||||||||...|||||.|||.||||.||.||   |.||.
BPUM_1703___t    192 TTCGGAGATTAAGGACGAAGAAGCAGCAAGAAAAAATGGCTA---TACTG    238

BSNT_02982___    251 AA---    252
                     ||   
BPUM_1703___t    239 AATAA    243


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