Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02973 and BPUM_1697

See Amino acid alignment / Visit BSNT_02973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_02973___sspP.1.24716.seq
#    -bsequence dna-align/BPUM_1697___sspP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02973___sspP-BPUM_1697___sspP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02973___sspP-BPUM_1697___sspP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02973___sspP
# 2: BPUM_1697___sspP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     117/150 (78.0%)
# Similarity:   117/150 (78.0%)
# Gaps:           6/150 ( 4.0%)
# Score: 436.0
# 
#
#=======================================

BSNT_02973___      1 ATGACCAATAAGAATACAAGTAAAGATATGCATAAAAACGCCCCTAAAGG     50
                     |||||.|||||.||.|||.|.|||||.||.|.|.|||||.|.|||||||.
BPUM_1697___s      1 ATGACGAATAAAAACACAGGAAAAGACATCCGTCAAAACTCGCCTAAAGA     50

BSNT_02973___     51 ACA-CAATCCCGGCCAACCTGAGCCTCTAAGCGGAAGCAAAAAAGTAAAG     99
                     ||| ||| ..|||.||.||||||||..||...||.||.||||||||.|||
BPUM_1697___s     51 ACATCAA-AGCGGACAGCCTGAGCCATTATCAGGCAGTAAAAAAGTGAAG     99

BSNT_02973___    100 AACCGAAACCATACAAGACAAAAGCACAA--CTCAAGCCATGATATGTAA    147
                     |||||.|||||||||||||||||||||||  ||||  .||.|||||||||
BPUM_1697___s    100 AACCGTAACCATACAAGACAAAAGCACAATTCTCA--TCACGATATGTAA    147


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