Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02963 and BPUM_1692
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_02963___yneF.1.24716.seq
# -bsequence dna-align/BPUM_1692___yneF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02963___yneF-BPUM_1692___yneF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02963___yneF-BPUM_1692___yneF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02963___yneF
# 2: BPUM_1692___yneF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 193/219 (88.1%)
# Similarity: 193/219 (88.1%)
# Gaps: 0/219 ( 0.0%)
# Score: 861.0
#
#
#=======================================
BSNT_02963___ 1 ATGACTTTATGGGTTGGCATCCTAGTGGGCGTTGTTGCATTGCTCATAGG 50
|||..|||||||||||.||||||.||.||||||||||||.||||...|||
BPUM_1692___y 1 ATGGATTTATGGGTTGTCATCCTTGTAGGCGTTGTTGCACTGCTTGCAGG 50
BSNT_02963___ 51 TGTTGCACTCGGGTTTTTTATTGCTCGTAAATATATGATGAGCTACCTGA 100
.|||||||||||.||.||||||||||||||.|||||||||||||||.|||
BPUM_1692___y 51 AGTTGCACTCGGATTCTTTATTGCTCGTAAGTATATGATGAGCTACTTGA 100
BSNT_02963___ 101 AAAAGAATCCGCCTATTAATGAACAAATGTTACGCATGATGATGATGCAA 150
||||||||||.||.|||||||||||||||.|.||.|||||||||||||||
BPUM_1692___y 101 AAAAGAATCCACCAATTAATGAACAAATGCTTCGAATGATGATGATGCAA 150
BSNT_02963___ 151 ATGGGAATGAAACCTTCTCAAAAGAAAATCAATCAAATGATGAAAGCCAT 200
|||||.||||||||.||.||.|||||||||||||||||||||||||||||
BPUM_1692___y 151 ATGGGCATGAAACCGTCCCAGAAGAAAATCAATCAAATGATGAAAGCCAT 200
BSNT_02963___ 201 GAATAATCAAACGAAATAA 219
|||.||.|||.||||||||
BPUM_1692___y 201 GAACAACCAAGCGAAATAA 219
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