Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00990 and BPUM_1659
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence dna-align/BSNT_00990___ydhG.1.24716.seq
# -bsequence dna-align/BPUM_1659___ydhG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00990___ydhG-BPUM_1659___ydhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00990___ydhG-BPUM_1659___ydhG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00990___ydhG
# 2: BPUM_1659___ydhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 243/389 (62.5%)
# Similarity: 243/389 (62.5%)
# Gaps: 34/389 ( 8.7%)
# Score: 607.5
#
#
#=======================================
BSNT_00990___ 1 ATGGACGTTTTTTCTGAGTAT-TTAGCGGGGATTGATGACCCGTTCCA-- 47
|||.|.||.|||...||.||| |.||| ...||||.|.| ||||
BPUM_1659___y 1 ATGCATGTGTTTGAAGAATATGTAAGC-AACATTGGTAA-----TCCAGA 44
BSNT_00990___ 48 --CCAAG-AAAGAACGGAAGAGGTGTTGAC-TTGGATCAAAGATAAATAT 93
..||| ||.|.|||.||||..| ||.|| .|||||...|||.|.||..
BPUM_1659___y 45 GCTGAAGCAACGCACGCAAGACAT-TTTACAATGGATATTAGACACATTC 93
BSNT_00990___ 94 CCAAATTTACATACAGAAATAAAATGGAACCAACCGATGTTTACGGATCA 143
||..|..||.|..||..|||....|||||.||.||.|||||.||.||.||
BPUM_1659___y 94 CCTCAACTAGAGCCAAGAATTGCTTGGAATCAGCCCATGTTCACAGACCA 143
BSNT_00990___ 144 CGGTACATTTATTATTGGCTTTAGTGTTTCTAAAAA--GCATTTAGCTGT 191
.||.||||||||||||||.|||||.||..|.|||.| .||||| ||||
BPUM_1659___y 144 TGGCACATTTATTATTGGGTTTAGCGTGGCAAAACATCACATTT--CTGT 191
BSNT_00990___ 192 CGCTCCTGAA---AAAGTAACGATAGCGCACGTAGAGGATGATATTGTGA 238
.||.||.||| ||||.| ||.|..|||.|....|.|||.|||||..
BPUM_1659___y 192 TGCACCAGAAGGTAAAGGA---ATTGAACACTTTTCAGCTGACATTGTAC 238
BSNT_00990___ 239 AGGCCGGATATGATTACACCGAGCAGCTGATACGTATCCCTT---GGAAC 285
|.||.||.||.||| ||..||..| .|.|.||.||.|.| ||||.
BPUM_1659___y 239 AAGCGGGTTACGAT--CATGGAAAA---AAGATGTTTCGCATGAAGGAAA 283
BSNT_00990___ 286 GGT--CCAGTTGATTACACGCTACTTGAGAAAATGATTGAGTTTAATATT 333
|.| ||||||||.||..|.||.||..|||||||.||.||.||||||||.
BPUM_1659___y 284 GCTTGCCAGTTGACTATCCTCTCCTAAAGAAAATCATCGAATTTAATATC 333
BSNT_00990___ 334 CTGGATAAGGCGGACTGCTCCACTTTTTGGCGGAAATGA 372
...||.||.|||||.||..|.||.||||||||.||||.|
BPUM_1659___y 334 GAAGACAAAGCGGATTGTACAACGTTTTGGCGAAAATAA 372
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