Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02795 and BPUM_1630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_02795___nrdF.1.24716.seq
# -bsequence dna-align/BPUM_1630___nrdF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02795___nrdF-BPUM_1630___nrdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02795___nrdF-BPUM_1630___nrdF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02795___nrdF
# 2: BPUM_1630___nrdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity: 779/997 (78.1%)
# Similarity: 779/997 (78.1%)
# Gaps: 23/997 ( 2.3%)
# Score: 3027.5
#
#
#=======================================
BSNT_02795___ 1 GTGACAAAAATTTATGACGCAGCAAACTGGTCAAAGCATGAAGACGATTT 50
|||||||||||||||||.|||||.|||||||||||.||.|||||||||||
BPUM_1630___n 1 GTGACAAAAATTTATGATGCAGCCAACTGGTCAAAACACGAAGACGATTT 50
BSNT_02795___ 51 TACCCAAATGTTCTATAACCAAAACGTGAAACAGTTCTGGCTTCCGGAAG 100
|||.||||||||.||.||||||||.|||||.||||||||||||||.||||
BPUM_1630___n 51 TACACAAATGTTTTACAACCAAAATGTGAAGCAGTTCTGGCTTCCTGAAG 100
BSNT_02795___ 101 AGATTGCTTTAAACGGCGATCTCCTCACATGGAAGTACCTCGGAAAAAAT 150
|||||.|.||||||||.||||||.|.||.|||||.||..|.||..||||.
BPUM_1630___n 101 AGATTTCCTTAAACGGGGATCTCTTAACGTGGAAATATTTAGGTGAAAAA 150
BSNT_02795___ 151 GAGCAGGACACTTATATGAAGGTACTGGCCGGACTTACGCTTCTTGATAC 200
||||..||.||.||.|||||||||||.||.|||||.||..|.||||||||
BPUM_1630___n 151 GAGCGAGATACGTACATGAAGGTACTTGCTGGACTGACTTTACTTGATAC 200
BSNT_02795___ 201 AGAGCAGGGGAATACGGGGATGCCGATCGTGGCTGAACACGTAGACGGCC 250
|||.||.||.|||||.|||||||||||.|||||||||||.|||||.||.|
BPUM_1630___n 201 AGAACAAGGAAATACAGGGATGCCGATTGTGGCTGAACATGTAGAAGGTC 250
BSNT_02795___ 251 ACCAGCGGAAAGCGGTGCTGAACTTTATGGCGATGATGGAGAACGCTGTC 300
|.|||||.||||||||..|.||||||||||||||||||||.||.||.||.
BPUM_1630___n 251 ATCAGCGTAAAGCGGTATTAAACTTTATGGCGATGATGGAAAATGCGGTA 300
BSNT_02795___ 301 CATGCGAAGTCGTACTCTAATATTTTCATGACCCTTGCACCGACTGAAAC 350
||||||||.||.|||||.|||||.||||||||.||||||||.||||||||
BPUM_1630___n 301 CATGCGAAATCATACTCAAATATCTTCATGACACTTGCACCAACTGAAAC 350
BSNT_02795___ 351 GATCAATGAAGTATTTGAATGGGTTAAACAAAATAAATATTTGCAGAAAA 400
|||||.||||||.|||||||||||.|||.|.|||||||..|||||.||.|
BPUM_1630___n 351 GATCAGTGAAGTGTTTGAATGGGTCAAAAAGAATAAATTCTTGCAAAAGA 400
BSNT_02795___ 401 AAGCGCAAATGATTGTCGGGCTT-TACAAAGCCATTCAAAAAGATGATGA 449
||||..|.|||||||| ..|||| |||....|.|||||.||.||.|||..
BPUM_1630___n 401 AAGCAGATATGATTGT-TAGCTTATACCGTTCGATTCAGAAGGACGATCC 449
BSNT_02795___ 450 AATTTCACTGTTCAAAGCCATGGTTGCTTCCGTCTATCTGGAAAGCTTCC 499
.|||||.||.||.|||||.|||||||||||.||.|||.|.||||||||||
BPUM_1630___n 450 GATTTCCCTCTTTAAAGCAATGGTTGCTTCTGTTTATTTAGAAAGCTTCC 499
BSNT_02795___ 500 TTTTCTACAGCGGTTTCTATTATCCGTTATATTTCTACGGACAAGGAAAA 549
|.||.|||||.|||||.||.||.||..|.||||||||.||.||||||||.
BPUM_1630___n 500 TGTTTTACAGTGGTTTTTACTACCCACTTTATTTCTATGGTCAAGGAAAG 549
BSNT_02795___ 550 CTGATGCAAAGCGGTGAGATCATTAACCTGATCCTTCGTGACGAAGCGAT 599
||.||||||||.|||||.|||||.|||.||||..|.|||||.||||||||
BPUM_1630___n 550 CTCATGCAAAGTGGTGAAATCATCAACTTGATTTTGCGTGATGAAGCGAT 599
BSNT_02795___ 600 TCACGGCGTGTATGTCGGTCTCCTTGCTCAGGAAATTTATAATAAACA-- 647
|||.||.||.||.||.||..|..|.||.||.||||||||.||.|||||
BPUM_1630___n 600 TCATGGTGTATACGTTGGATTATTAGCACAAGAAATTTACAACAAACAAA 649
BSNT_02795___ 648 -GACAGAAGAGAAAAAAGCAGAGCTTCGT--GAATTTGCGATTGACCTTC 694
|.|.||.|.|.|||| |||||| || ||.||..||||||||||..
BPUM_1630___n 650 CGCCTGACGTGCAAAA---AGAGCT--GTACGATTTCTCGATTGACCTCT 694
BSNT_02795___ 695 TGAATCAGTTATATGAAAATGAGCTTGAGTATACAGAGGACTTGTACGAT 744
||||..||.|.|||||||||||.|||.|.||.||.||.||..|.||.||.
BPUM_1630___n 695 TGAACGAGCTTTATGAAAATGAACTTCATTACACGGAAGATATATATGAC 744
BSNT_02795___ 745 CAAGTCGGACTCTCACACGATGTAAAGAAATTCATCCGCTATAATGCGAA 794
||||||....|.||.||.|||||.||.||.|||||.||.||.|||||.||
BPUM_1630___n 745 CAAGTCAATTTATCGCATGATGTGAAAAAGTTCATTCGTTACAATGCCAA 794
BSNT_02795___ 795 TAAAGCGCTGATGAATCTTGGATTTGATCCATACTTCGAAGAGGAAGATA 844
|||||||.|.|||||.||||||||||..||.|||||.|||||.|||||.|
BPUM_1630___n 795 TAAAGCGTTAATGAACCTTGGATTTGCCCCTTACTTTGAAGAAGAAGAGA 844
BSNT_02795___ 845 TTAATCCGATCGTATTAAACGGATTAAACACAAAAACAAAATCGCATGAC 894
|.|||||.||.|||||.||||||.|.||.|||||||||||||||||||||
BPUM_1630___n 845 TCAATCCAATTGTATTGAACGGACTCAATACAAAAACAAAATCGCATGAC 894
BSNT_02795___ 895 TTCTTCTCTATGAAGGGGAATGGTTATAAAAAAGCGACAGTTGAGCCGCT 944
||||||||.|||||.|||||.||.||.|||||.|||||.||||||||..|
BPUM_1630___n 895 TTCTTCTCAATGAAAGGGAACGGCTACAAAAAGGCGACGGTTGAGCCATT 944
BSNT_02795___ 945 CAAAGATGATGACTTTTATTTTGAAGATGAAAAAGAGCAGAT-ATAA 990
.||||||||.|||||.|..||||.|||||| || ||||
BPUM_1630___n 945 AAAAGATGACGACTTCTTCTTTGGAGATGA----------ATCATAA 981
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