Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02795 and BPUM_1630

See Amino acid alignment / Visit BSNT_02795 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_02795___nrdF.1.24716.seq
#    -bsequence dna-align/BPUM_1630___nrdF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02795___nrdF-BPUM_1630___nrdF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02795___nrdF-BPUM_1630___nrdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02795___nrdF
# 2: BPUM_1630___nrdF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity:     779/997 (78.1%)
# Similarity:   779/997 (78.1%)
# Gaps:          23/997 ( 2.3%)
# Score: 3027.5
# 
#
#=======================================

BSNT_02795___      1 GTGACAAAAATTTATGACGCAGCAAACTGGTCAAAGCATGAAGACGATTT     50
                     |||||||||||||||||.|||||.|||||||||||.||.|||||||||||
BPUM_1630___n      1 GTGACAAAAATTTATGATGCAGCCAACTGGTCAAAACACGAAGACGATTT     50

BSNT_02795___     51 TACCCAAATGTTCTATAACCAAAACGTGAAACAGTTCTGGCTTCCGGAAG    100
                     |||.||||||||.||.||||||||.|||||.||||||||||||||.||||
BPUM_1630___n     51 TACACAAATGTTTTACAACCAAAATGTGAAGCAGTTCTGGCTTCCTGAAG    100

BSNT_02795___    101 AGATTGCTTTAAACGGCGATCTCCTCACATGGAAGTACCTCGGAAAAAAT    150
                     |||||.|.||||||||.||||||.|.||.|||||.||..|.||..||||.
BPUM_1630___n    101 AGATTTCCTTAAACGGGGATCTCTTAACGTGGAAATATTTAGGTGAAAAA    150

BSNT_02795___    151 GAGCAGGACACTTATATGAAGGTACTGGCCGGACTTACGCTTCTTGATAC    200
                     ||||..||.||.||.|||||||||||.||.|||||.||..|.||||||||
BPUM_1630___n    151 GAGCGAGATACGTACATGAAGGTACTTGCTGGACTGACTTTACTTGATAC    200

BSNT_02795___    201 AGAGCAGGGGAATACGGGGATGCCGATCGTGGCTGAACACGTAGACGGCC    250
                     |||.||.||.|||||.|||||||||||.|||||||||||.|||||.||.|
BPUM_1630___n    201 AGAACAAGGAAATACAGGGATGCCGATTGTGGCTGAACATGTAGAAGGTC    250

BSNT_02795___    251 ACCAGCGGAAAGCGGTGCTGAACTTTATGGCGATGATGGAGAACGCTGTC    300
                     |.|||||.||||||||..|.||||||||||||||||||||.||.||.||.
BPUM_1630___n    251 ATCAGCGTAAAGCGGTATTAAACTTTATGGCGATGATGGAAAATGCGGTA    300

BSNT_02795___    301 CATGCGAAGTCGTACTCTAATATTTTCATGACCCTTGCACCGACTGAAAC    350
                     ||||||||.||.|||||.|||||.||||||||.||||||||.||||||||
BPUM_1630___n    301 CATGCGAAATCATACTCAAATATCTTCATGACACTTGCACCAACTGAAAC    350

BSNT_02795___    351 GATCAATGAAGTATTTGAATGGGTTAAACAAAATAAATATTTGCAGAAAA    400
                     |||||.||||||.|||||||||||.|||.|.|||||||..|||||.||.|
BPUM_1630___n    351 GATCAGTGAAGTGTTTGAATGGGTCAAAAAGAATAAATTCTTGCAAAAGA    400

BSNT_02795___    401 AAGCGCAAATGATTGTCGGGCTT-TACAAAGCCATTCAAAAAGATGATGA    449
                     ||||..|.|||||||| ..|||| |||....|.|||||.||.||.|||..
BPUM_1630___n    401 AAGCAGATATGATTGT-TAGCTTATACCGTTCGATTCAGAAGGACGATCC    449

BSNT_02795___    450 AATTTCACTGTTCAAAGCCATGGTTGCTTCCGTCTATCTGGAAAGCTTCC    499
                     .|||||.||.||.|||||.|||||||||||.||.|||.|.||||||||||
BPUM_1630___n    450 GATTTCCCTCTTTAAAGCAATGGTTGCTTCTGTTTATTTAGAAAGCTTCC    499

BSNT_02795___    500 TTTTCTACAGCGGTTTCTATTATCCGTTATATTTCTACGGACAAGGAAAA    549
                     |.||.|||||.|||||.||.||.||..|.||||||||.||.||||||||.
BPUM_1630___n    500 TGTTTTACAGTGGTTTTTACTACCCACTTTATTTCTATGGTCAAGGAAAG    549

BSNT_02795___    550 CTGATGCAAAGCGGTGAGATCATTAACCTGATCCTTCGTGACGAAGCGAT    599
                     ||.||||||||.|||||.|||||.|||.||||..|.|||||.||||||||
BPUM_1630___n    550 CTCATGCAAAGTGGTGAAATCATCAACTTGATTTTGCGTGATGAAGCGAT    599

BSNT_02795___    600 TCACGGCGTGTATGTCGGTCTCCTTGCTCAGGAAATTTATAATAAACA--    647
                     |||.||.||.||.||.||..|..|.||.||.||||||||.||.|||||  
BPUM_1630___n    600 TCATGGTGTATACGTTGGATTATTAGCACAAGAAATTTACAACAAACAAA    649

BSNT_02795___    648 -GACAGAAGAGAAAAAAGCAGAGCTTCGT--GAATTTGCGATTGACCTTC    694
                      |.|.||.|.|.||||   ||||||  ||  ||.||..||||||||||..
BPUM_1630___n    650 CGCCTGACGTGCAAAA---AGAGCT--GTACGATTTCTCGATTGACCTCT    694

BSNT_02795___    695 TGAATCAGTTATATGAAAATGAGCTTGAGTATACAGAGGACTTGTACGAT    744
                     ||||..||.|.|||||||||||.|||.|.||.||.||.||..|.||.||.
BPUM_1630___n    695 TGAACGAGCTTTATGAAAATGAACTTCATTACACGGAAGATATATATGAC    744

BSNT_02795___    745 CAAGTCGGACTCTCACACGATGTAAAGAAATTCATCCGCTATAATGCGAA    794
                     ||||||....|.||.||.|||||.||.||.|||||.||.||.|||||.||
BPUM_1630___n    745 CAAGTCAATTTATCGCATGATGTGAAAAAGTTCATTCGTTACAATGCCAA    794

BSNT_02795___    795 TAAAGCGCTGATGAATCTTGGATTTGATCCATACTTCGAAGAGGAAGATA    844
                     |||||||.|.|||||.||||||||||..||.|||||.|||||.|||||.|
BPUM_1630___n    795 TAAAGCGTTAATGAACCTTGGATTTGCCCCTTACTTTGAAGAAGAAGAGA    844

BSNT_02795___    845 TTAATCCGATCGTATTAAACGGATTAAACACAAAAACAAAATCGCATGAC    894
                     |.|||||.||.|||||.||||||.|.||.|||||||||||||||||||||
BPUM_1630___n    845 TCAATCCAATTGTATTGAACGGACTCAATACAAAAACAAAATCGCATGAC    894

BSNT_02795___    895 TTCTTCTCTATGAAGGGGAATGGTTATAAAAAAGCGACAGTTGAGCCGCT    944
                     ||||||||.|||||.|||||.||.||.|||||.|||||.||||||||..|
BPUM_1630___n    895 TTCTTCTCAATGAAAGGGAACGGCTACAAAAAGGCGACGGTTGAGCCATT    944

BSNT_02795___    945 CAAAGATGATGACTTTTATTTTGAAGATGAAAAAGAGCAGAT-ATAA    990
                     .||||||||.|||||.|..||||.||||||          || ||||
BPUM_1630___n    945 AAAAGATGACGACTTCTTCTTTGGAGATGA----------ATCATAA    981


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