Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02791 and BPUM_1627
See
Amino acid alignment /
Visit
BSNT_02791 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_02791___ymzA.1.24716.seq
# -bsequence dna-align/BPUM_1627___ymzA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02791___ymzA-BPUM_1627___ymzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02791___ymzA-BPUM_1627___ymzA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02791___ymzA
# 2: BPUM_1627___ymzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 154/243 (63.4%)
# Similarity: 154/243 (63.4%)
# Gaps: 42/243 (17.3%)
# Score: 482.0
#
#
#=======================================
BSNT_02791___ 1 ATGAAGCATAAAGTGATCGTGAATCATTGGGAAGAAATTTGCGAAGATGA 50
||||..||.|||.|.|...|.||||||||||||.|||.|||.|||||.||
BPUM_1627___y 1 ATGACACACAAAATTAAAATTAATCATTGGGAACAAACTTGTGAAGACGA 50
BSNT_02791___ 51 TTCTTGCTATGAATACGGAACAA--GTATCATTGTGAACGGAAAAGAATT 98
.||.||.|..|||||.||||||| ||.|| |||.||.||.||||||||
BPUM_1627___y 51 CTCCTGTTTCGAATATGGAACAAGCGTTTC--TGTAAATGGGAAAGAATT 98
BSNT_02791___ 99 AATCAGAGAAGCGTCAATTATCACTGC-TTTGAAGGCGGTTTTAGAAGAG 147
|.||||||||||.|||||..||.|||| .||||| |||||..||.||||.
BPUM_1627___y 99 AGTCAGAGAAGCTTCAATCGTCTCTGCGCTTGAA-GCGGTGCTAAAAGAA 147
BSNT_02791___ 148 ATCGGCGCGGATGTTGAAAT---AGAAGAAACAG------TAGAGAGCGA 188
.|.||.|..||.||.||||| |||||...||| ||.||.|||
BPUM_1627___y 148 TTAGGTGTTGAAGTGGAAATTACAGAAGTGTCAGAAGATTTACAGTGCG- 196
BSNT_02791___ 189 AAAATGCTGTGATAGCTTAAGAAAAAAAAATCTAGACTACTAA 231
|||| || |.||||||.||
BPUM_1627___y 197 ---ATGC--------CT--ACAAAAAATAA------------- 213
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.