Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02789 and BPUM_1625
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_02789___hfq.1.24716.seq
# -bsequence dna-align/BPUM_1625___hfq.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02789___hfq-BPUM_1625___hfq.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02789___hfq-BPUM_1625___hfq.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02789___hfq
# 2: BPUM_1625___hfq
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 178/222 (80.2%)
# Similarity: 178/222 (80.2%)
# Gaps: 0/222 ( 0.0%)
# Score: 714.0
#
#
#=======================================
BSNT_02789___ 1 ATGAAACCGATTAATATTCAGGATCAGTTTTTGAATCAAATCCGGAAAGA 50
|||||||||||||||||||||||.||.|||||||||||||||||.|||||
BPUM_1625___h 1 ATGAAACCGATTAATATTCAGGACCAATTTTTGAATCAAATCCGCAAAGA 50
BSNT_02789___ 51 AAATACGTATGTCACTGTTTTTTTGCTGAACGGCTTTCAGTTGCGGGGCC 100
.|||||.|.||||||.||.||.||.|||||.|||||||||.|.||.||.|
BPUM_1625___h 51 CAATACATTTGTCACAGTATTCTTACTGAATGGCTTTCAGCTTCGCGGTC 100
BSNT_02789___ 101 AGGTGAAAGGCTTTGATAACTTTACCGTATTGTTGGAATCGGAAGGTAAG 150
|.||||||||.|||||.||.||.||.||..||.|.|||.|.|||||.|||
BPUM_1625___h 101 AAGTGAAAGGATTTGACAATTTCACGGTGCTGCTTGAAACAGAAGGGAAG 150
BSNT_02789___ 151 CAGCAGCTTATATATAAACATGCGATCTCAACGTTTGCGCCGCAAAAAAA 200
|||||||||||.||||||||.||.||.||.||.|||||.||.|||||.||
BPUM_1625___h 151 CAGCAGCTTATTTATAAACACGCCATTTCTACATTTGCTCCTCAAAAGAA 200
BSNT_02789___ 201 CGTCCAGCTTGAACTCGAATAG 222
.||..|.||.|||.|.||||||
BPUM_1625___h 201 TGTAAATCTAGAATTAGAATAG 222
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