Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02753 and BPUM_1607

See Amino acid alignment / Visit BSNT_02753 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence dna-align/BSNT_02753___cotE.1.24716.seq
#    -bsequence dna-align/BPUM_1607___cotE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02753___cotE-BPUM_1607___cotE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02753___cotE-BPUM_1607___cotE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02753___cotE
# 2: BPUM_1607___cotE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     427/553 (77.2%)
# Similarity:   427/553 (77.2%)
# Gaps:          14/553 ( 2.5%)
# Score: 1651.5
# 
#
#=======================================

BSNT_02753___      1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG     50
                     ||||||||||||||.|||||||||||.||.||.||.||.||.|||||..|
BPUM_1607___c      1 ATGTCTGAATACAGAGAAATTATTACAAAAGCGGTGGTTGCAAAAGGGAG     50

BSNT_02753___     51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGAAAAAACCGAGCA    100
                     .||||||||||||.||||..||||.||.||.||...|.|||||||.|.||
BPUM_1607___c     51 GAAATTCACCCAAAGCACACACACGATTTCTCCATCGCAAAAACCAACCA    100

BSNT_02753___    101 GCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAATT    150
                     ||||..|.|||||||||||.|||||.||.||.|||||.||||||||..|.
BPUM_1607___c    101 GCATCCTAGGTGGTTGGATCATTAATCATAATTATGATGCTGAAAAGGTC    150

BSNT_02753___    151 GGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACTC    200
                     ||.|||||.||.||.||||||||....|..|||||.|||||||||||.||
BPUM_1607___c    151 GGTAAAACTGTTGAGATTGAAGGAACCTTCGATATTAACGTATGGTATTC    200

BSNT_02753___    201 TTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATATG    250
                     ||||||.||.||||||||.|||||.||||||||.||||||||.|||||||
BPUM_1607___c    201 TTACGCCGATAACACAAAAACAGAAGTTGTCACTGAACGGGTGAAATATG    250

BSNT_02753___    251 TAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGAG    300
                     ||||..||||.|||||.|||||.|.||||||.||||.|.|.|||||||||
BPUM_1607___c    251 TAGACATCATCAAACTGAGATATAAAGACAAAAATTTCCTTGATGATGAG    300

BSNT_02753___    301 CATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGAC    350
                     ||||||||||||||.||||||||.||||||||.||.|||.|.||||||||
BPUM_1607___c    301 CATGAAGTGATTGCAAAAGTGCTCCAGCAGCCGAATTGCTTAGAAGTGAC    350

BSNT_02753___    351 CATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTTT    400
                     ||||||.||.||.||.||||||||..|.||.||.|||||..|.|||||..
BPUM_1607___c    351 CATTTCTCCAAACGGCAATAAAATTATCGTTCAAGCAGAGCGGGAATTCA    400

BSNT_02753___    401 TGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGAC    450
                     |.||.|||||||||||.||||||||..|.|||||.|||||||||.| .|.
BPUM_1607___c    401 TTGCTGAAGTGGTAGGAGAAACAAAAATTGTTGTAGAGGTCAATTC-AAG    449

BSNT_02753___    451 TGGG-------AAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATG    493
                     |.||       ||||.|||.|||||      ||||||||.|||.|.||||
BPUM_1607___c    450 TTGGAAAGAAAAAGATGATCACGAG------TGGGAAGAAGAGGTGGATG    493

BSNT_02753___    494 AAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAA    543
                     |.|||.|.||.||.||..|.||.||.|||.|||.|||.|||||.|||||.
BPUM_1607___c    494 AGGAGTTAGAGGATATTCATCCAGAATTTCTAGCGGGTGATCCAGAAGAG    543

BSNT_02753___    544 TAA    546
                     |||
BPUM_1607___c    544 TAA    546


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