Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02736 and BPUM_1594
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_02736.1.24716.seq
# -bsequence dna-align/BPUM_1594.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02736-BPUM_1594.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02736-BPUM_1594.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02736
# 2: BPUM_1594
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 796
# Identity: 624/796 (78.4%)
# Similarity: 624/796 (78.4%)
# Gaps: 8/796 ( 1.0%)
# Score: 2384.0
#
#
#=======================================
BSNT_02736 1 TTGGCAAAGCTCGAATGGTATTTTGAATATGAAATTCAAGTGAACCGCCC 50
||||||||||||||||||||||||||||||||.||.||.||.|||||.||
BPUM_1594 1 TTGGCAAAGCTCGAATGGTATTTTGAATATGAGATACAGGTAAACCGTCC 50
BSNT_02736 51 CGGACTGCTCGGGGATATTTCATCTCTTCTTGGGATGCTTTCTATCAACA 100
||||||..|.||.||.|||||||||||..|.|||||||||||.||.||.|
BPUM_1594 51 CGGACTATTAGGAGACATTTCATCTCTGATGGGGATGCTTTCAATTAATA 100
BSNT_02736 101 TCGTAACGATAAACGGCGTCGATCTTTCCAGAAGGGGAATGCTCCTCAGG 150
|.||.||.||.||.||.||.|||.|.||.|||.|.||||||||.||..|.
BPUM_1594 101 TTGTGACAATTAATGGTGTTGATGTATCAAGACGCGGAATGCTTCTGCGC 150
BSNT_02736 151 TGCCGCCATATAGATCAAATTAAACGATTAGAATCAATCTTAAAAACGAT 200
||...|||.|.|||.||||||||.||..|.||||||||.|||||.||.||
BPUM_1594 151 TGTGACCACACAGACCAAATTAAGCGCCTTGAATCAATTTTAAATACAAT 200
BSNT_02736 201 GGAAACAATTAAAGTAACGAAGCTTAGAGAACCGAGGCTTCGCGACCGAC 250
||||||.||.|||||||||||..|.|||.|.||.|..|||||.||||| |
BPUM_1594 201 GGAAACGATAAAAGTAACGAAATTAAGACAGCCAAAACTTCGTGACCG-C 249
BSNT_02736 251 TT-GCCGTACGCCACGGCCGTTATATTCAACGGGATGCCGATGACAAGAA 299
|| ||.||.||.||||||.|.||||||||.||.|||||.||||||||.||
BPUM_1594 250 TTAGCGGTTCGTCACGGCAGATATATTCAGCGTGATGCAGATGACAAAAA 299
BSNT_02736 300 AACGTTCCGCTTTGAACGGGACGAGCTTGG-CTTATTAGTCGATTTTATG 348
.||||||||.||||||.||||||||||||| |||.|| ||.|||||||||
BPUM_1594 300 GACGTTCCGATTTGAAAGGGACGAGCTTGGTCTTCTT-GTTGATTTTATG 348
BSNT_02736 349 GCCGAATTGTTCAAAAAAGAAGGCCATAAATTAATCGGAATCAGAGGTAT 398
||.||..|.||.|||||||||||.||||||||.||.||.||..|.||.||
BPUM_1594 349 GCTGAGCTATTTAAAAAAGAAGGACATAAATTGATTGGGATTCGCGGGAT 398
BSNT_02736 399 GCCGCGTGTCGGGAAAACGGAATCGATTGTAGCCTCTAGTGTGTGTGCAA 448
||||||||||||.|||||.|||||.|||||.|||||.|||||.|||||.|
BPUM_1594 399 GCCGCGTGTCGGAAAAACAGAATCAATTGTGGCCTCAAGTGTATGTGCCA 448
BSNT_02736 449 GCAAAAGGTGGCTGTTTGTGTCATCAAC-CTTGCTGAAGCAGACGATAAG 497
|||||||.|||||.|||||.|||||.|| ||| .||||.||||||||..|
BPUM_1594 449 GCAAAAGATGGCTTTTTGTATCATCCACTCTT-TTGAAACAGACGATCCG 497
BSNT_02736 498 AAGCCAGCTGATTGCCGATGAATACAGCACTGAAAATGTCTTTATCGTTG 547
|||.||.||||||||.||||||||.|||.|.||.||.||.|||||..|||
BPUM_1594 498 AAGTCAACTGATTGCGGATGAATATAGCCCAGATAACGTTTTTATTATTG 547
BSNT_02736 548 ACGGAATTGTGTCAACACGAAGAGGATCGGA-ACGCCATCTCCAGCTGGT 596
|.||.||||||||.||.||||||||.||.|| |.| ||..|.|||||..|
BPUM_1594 548 ATGGGATTGTGTCGACGCGAAGAGGTTCTGAGAAG-CACTTGCAGCTTTT 596
BSNT_02736 597 CCGAGAAATCATGCGGCTGCCTGCAACAAAAGTGGTGGAGCATCCGGACA 646
..|||||||.|||.|.|||||.|||||.|||||.||.||||||||.||||
BPUM_1594 597 AAGAGAAATTATGAGACTGCCGGCAACGAAAGTAGTAGAGCATCCAGACA 646
BSNT_02736 647 TATTCGTTCAAAATACAGAGTATACACTAGATGACTTTGATTATATTATT 696
|.||..||||||||.||||.||||||.|.|||||.||.||.|||||||||
BPUM_1594 647 TCTTTATTCAAAATTCAGAATATACAATGGATGATTTCGACTATATTATT 696
BSNT_02736 697 GAACTGAGAAATGACCCTGATGAGGTTATTACATATGAACATGCCGAGGA 746
|||.||.|.|||....|.|||||.|..|||||||||||.||.||.||.||
BPUM_1594 697 GAATTGCGTAATAGTGCAGATGAAGAGATTACATATGAGCACGCTGAAGA 746
BSNT_02736 747 ACCCCAAATGTTTGATCAATCCGGGTTTTCAAGCTTTGATTTTTAA 792
|||.|||.||||||||||.||.||.|||||..||||.|||||||||
BPUM_1594 747 ACCACAAGTGTTTGATCATTCTGGTTTTTCTGGCTTCGATTTTTAA 792
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