Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02734 and BPUM_1592
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:23
# Commandline: needle
# -asequence dna-align/BSNT_02734___ymfI.1.24716.seq
# -bsequence dna-align/BPUM_1592___fabG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02734___ymfI-BPUM_1592___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02734___ymfI-BPUM_1592___fabG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02734___ymfI
# 2: BPUM_1592___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity: 497/806 (61.7%)
# Similarity: 497/806 (61.7%)
# Gaps: 154/806 (19.1%)
# Score: 1398.5
#
#
#=======================================
BSNT_02734___ 1 ATGAACAAAACA--------GCACTAATCACCGGAGCAAGCGGCGGCAT- 41
||| | ||.||.||.||.||.||.||.|||||.||
BPUM_1592___f 1 ATG--------AGTCGTTGGGCGCTGATAACAGGTGCCAGTGGCGGGATC 42
BSNT_02734___ 42 TGGCAAAAGCATCAG-CGAAACCCTTGCAGCTAG--AGGATACAATCTGC 88
.||| |.||..||| |.|||..||||| |.|| |||.|.|.|..||.
BPUM_1592___f 43 GGGC--AGGCTGCAGCCAAAAGGCTTGC--CCAGGAAGGCTGCCACATGA 88
BSNT_02734___ 89 TGCTGCATTACAATACAAATCAAAATGCGGCAGC---GGAGCTTGCTG-- 133
|.||.|||||..|.|.||||.||.| |||||| ..|||||||.|
BPUM_1592___f 89 TACTCCATTATCACAAAAATGAACA---GGCAGCCATCAAGCTTGCCGCT 135
BSNT_02734___ 134 --------AAAAAC---------TAAGTCAGATGTTTGGCGTAAATGCGG 166
|.|||| |.||.||.|||| ||
BPUM_1592___f 136 GAGCTGGAAGAAACGTATCATATTCAGACACATGT------------CG- 172
BSNT_02734___ 167 AGATATTACAAGCTGATCTGTCCGCGCA-----AGATGGAGCAGATAAGC 211
|.|||||.|||.| .||| ||..|||||.|||||||
BPUM_1592___f 173 ------TTCAAGCAGATTT-----AGCAAAAATAGGCGGAGCTGATAAGC 211
BSNT_02734___ 212 T-GACA-AGTTCAAT-----TGTTCAGCCTATTGATGCGATTGTTTTAAA 254
| |.|| |..||.|| |.|.||| .|||| .||||.|||||
BPUM_1592___f 212 TCGTCAGACGTCTATCTGTATCTCCAG-ATATT------CTTGTATTAAA 254
BSNT_02734___ 255 CAGTGG-AAGAAGCCATTTTGGGCTGATT----ACGGATGTAGATA---A 296
.||.|| ||| ||.||| |.|.|||| ||.|||..|||.| |
BPUM_1592___f 255 TAGCGGTAAG-AGTCAT----GTCGGATTAGTAACAGATACAGAAAAAGA 299
BSNT_02734___ 297 CGCAACAGTCCAGGAAATGGTTCAGCTTCATGTGGCGAGTCCGTATATG- 345
||.|..|| |||| .|||||||||||||||||..|.||||| |||||
BPUM_1592___f 300 CGTATTAG-CCAG--TATGGTTCAGCTTCATGTCACAAGTCC--ATATGA 344
BSNT_02734___ 346 -CTGACGAGAAACCTTCTGCCAGGCATGATTCGGAATAAATCGGGAGCGA 394
||.||...|.|.||..||||||.||||||||..||.|||.|.||....|
BPUM_1592___f 345 ACTTACCCAACAGCTATTGCCAGCCATGATTCAAAAAAAAGCAGGTCATA 394
BSNT_02734___ 395 TTGTGGCTGTCAGCTCGATTTGGGGAGAGACTGGAGCATCCTGTGAAGTG 444
||||.||.||.||||||||.||||||||.||.||.|||||.|||||||||
BPUM_1592___f 395 TTGTTGCGGTAAGCTCGATATGGGGAGAAACAGGGGCATCATGTGAAGTG 444
BSNT_02734___ 445 CTGTACAGCATGGCAAAAGGAGCTCAGCATTCGTTTGTAAAAGGATTGGC 494
||.||.|||||||..||.||.||.||..||.|||||.|.|||||..||||
BPUM_1592___f 445 CTATATAGCATGGTGAAGGGTGCGCAAAATGCGTTTATTAAAGGTCTGGC 494
BSNT_02734___ 495 TAAGGAGCTGGCGCCAAGCGGAATCAGAGTAAACGCCGTAGCGCCGGGCG 544
.||.|||||.||.|||||.|||||.||||.|||.||.||..|.||.||.|
BPUM_1592___f 495 AAAAGAGCTTGCCCCAAGTGGAATTAGAGCAAATGCTGTTTCACCAGGTG 544
BSNT_02734___ 545 CAGTTGATACAAATATGATGAATCAA--TTTACCCCGGCTGAAAAAGAAG 592
|.||..|||||.|||||||||| || ||.|| |.||||||
BPUM_1592___f 545 CTGTCCATACAGATATGATGAA--AAGCTTCAC---------ACAAGAAG 583
BSNT_02734___ 593 AGAT-----CGCT----GATGAGATTCCGATCGGCCGGCTGGC----CCG 629
|.|| .||| ||.||.||||||.|.||||||||.|| ||.
BPUM_1592___f 584 ATATTGACATGCTGGAGGAAGAAATTCCGCTTGGCCGGCTTGCATCACCT 633
BSNT_02734___ 630 GCCGCAAGAAATTGCTGATG-CAACAGCTTT-TCTCCTGTCTGAAAAAGC 677
| |.||.|||||||||| ||...|.||| ||.||| .|||||
BPUM_1592___f 634 G----AGGAGATTGCTGATGTCATTTGGTTTCTCGCCT------CAAAGC 673
BSNT_02734___ 678 -GTCA---TATATCACCGGCCAAATTCTGTCGGTGAATGGCGGCTGGCAC 723
|||| |||||.||.||.||||||.|.||.||.|||||.||||||.||
BPUM_1592___f 674 AGTCAAGTTATATGACAGGTCAAATTTTATCCGTTAATGGTGGCTGGTAC 723
BSNT_02734___ 724 TGTTGA 729
||||.|
BPUM_1592___f 724 TGTTAA 729
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