Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02733 and BPUM_1589
See
Amino acid alignment /
Visit
BSNT_02733 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_02733___ymfH.1.24716.seq
# -bsequence dna-align/BPUM_1589.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02733___ymfH-BPUM_1589.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02733___ymfH-BPUM_1589.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02733___ymfH
# 2: BPUM_1589
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1326
# Identity: 935/1326 (70.5%)
# Similarity: 935/1326 (70.5%)
# Gaps: 72/1326 ( 5.4%)
# Score: 3117.5
#
#
#=======================================
BSNT_02733___ 1 TTGA---TCAAACCAATCGAATATGAACAGCTTCAGGAGACGCTGTATCA 47
.||| |.|||.||||..|||..||.|||||.||.||.|||.|.|||||
BPUM_1589 1 ATGACAGTGAAAACAATTCAATTCGACCAGCTGCAAGAAACGGTCTATCA 50
BSNT_02733___ 48 TGAAAAAATGTCCAACGGCCTTGATGTTTACGTTTTGCCGAAAAAAGGCT 97
.|||||||||...|.|||.|||||.||.||.||..|.||.||..||||.|
BPUM_1589 51 CGAAAAAATGGAGAGCGGACTTGACGTCTATGTGCTCCCAAAGCAAGGGT 100
BSNT_02733___ 98 TCAACAAGACATATGCGGTCTTTACAACAAAGTACGGCTCGATAGATAAC 147
|.|||||.||.|||||....||||||||.||.||.|||||..|.||||||
BPUM_1589 101 TTAACAAAACCTATGCAACTTTTACAACCAAATATGGCTCTGTCGATAAC 150
BSNT_02733___ 148 CGGTTTGTCCCTTTAGGTAAAAACGAGATGGTTCACGTGCCGGACGGGAT 197
...|||||.||..|.||||||.|.||.|||.|||..|||||.|||||.||
BPUM_1589 151 GAATTTGTGCCGCTTGGTAAAGAAGACATGATTCGAGTGCCTGACGGAAT 200
BSNT_02733___ 198 TGCTCACTTTCTT-GAGCACAAGCTGTTTGAGAAAGCGGACGGAGACGTT 246
|||.|| |||||| |||||.||.||||||||.||||..||.||||||||.
BPUM_1589 201 TGCCCA-TTTCTTAGAGCATAAACTGTTTGAAAAAGAAGATGGAGACGTA 249
BSNT_02733___ 247 TTTCA-AGATTTCAGCAAACAGGGGGCTTCTGCCAATGCGTTTACGTCAT 295
||.|| |.|||| ||.|||||.|||||.||.||.|||||.||||||.|||
BPUM_1589 250 TTCCATACATTT-AGTAAACAAGGGGCATCCGCAAATGCTTTTACGACAT 298
BSNT_02733___ 296 TTACAAGAACGGCTTACCTTTTCTCAAGCACATCAAATGTTGAACGCAAT 345
||||.|||||.||||||.|.|||||||||||.||||||||.||||..||.
BPUM_1589 299 TTACGAGAACAGCTTACTTATTCTCAAGCACCTCAAATGTCGAACAAAAC 348
BSNT_02733___ 346 TTAGAGACGCTTATCGATTTCGTACAGGACCCATATTTTACTGAAAAAAC 395
.|.|||||.||.||.|||||.||.||.||.||.|||||||||||||||||
BPUM_1589 349 CTTGAGACACTCATTGATTTTGTTCAAGAGCCTTATTTTACTGAAAAAAC 398
BSNT_02733___ 396 GGTTGAAAAGGAAAAAGGGATTATCGGGCAGGAGATTAATATGTACGACG 445
|||.|||||.|||||.||.||.||.||.||.||||||||.|||||.||.|
BPUM_1589 399 GGTCGAAAAAGAAAAGGGCATCATTGGTCAAGAGATTAACATGTATGATG 448
BSNT_02733___ 446 ATAACCCTGATTGGAGGCTTTA--CTTCGGGGTCATTGAAAACATGTACA 493
|.||.||.||.|||.| |||| .|||||..|.||||||||..|.||..
BPUM_1589 449 ACAATCCGGACTGGCG--TTTATTTTTCGGTCTGATTGAAAATCTATATC 496
BSNT_02733___ 494 AAGAGCATCCTGTCAGAATTGACATAGCGGGAACAGTGGAAAGCATTTCA 543
|||||||.|||||.||||||||.|||||.|||||.||.|||||||||.|.
BPUM_1589 497 AAGAGCACCCTGTAAGAATTGATATAGCTGGAACTGTAGAAAGCATTGCT 546
BSNT_02733___ 544 CATATTACAAAAGACCTTCTTTATGAATGCTATGAAACGTTTTATCACCC 593
|..|||||||||||.|.|.|.||.|||||||||||||||||.|||||.||
BPUM_1589 547 CCGATTACAAAAGATCATTTGTACGAATGCTATGAAACGTTCTATCATCC 596
BSNT_02733___ 594 GAGTAACATGCTCCTTTTCATTGTCGGACCTGTAGATCCTGAAGCGATTA 643
.||.||.|||||.||.||..||.||||.||.||.||||| |.|||.|.||
BPUM_1589 597 AAGCAATATGCTTCTATTTGTTCTCGGTCCCGTTGATCC-GCAGCAAATA 645
BSNT_02733___ 644 TT-TCTCAGGTAAGAGAAAACCAGGGGAAAAAGCCGTATACTGATCAGCC 692
|| ..|||.||..|||.|||.||||.|||||||||.|.|||.||||||||
BPUM_1589 646 TTAGATCAAGTTCGAGCAAATCAGGCGAAAAAGCCTTTTACAGATCAGCC 695
BSNT_02733___ 693 GGAGATCAAACGGGAAGAAGTGAAAGAGCAAGAAGCGGTTTTCCGAAAAG 742
.|||||.|||||..||||..|.||.||||..||||..||.|.||||||||
BPUM_1589 696 AGAGATTAAACGAAAAGACATCAACGAGCCTGAAGGTGTGTACCGAAAAG 745
BSNT_02733___ 743 AAAAAGAGATCAAAATGAACGTGCAGGGACCGAAATGCCT-TGTTGGGCT 791
|..|.||..|...|||||||||.||.||..||||||| | ||||.||.|
BPUM_1589 746 AGTACGAACTTCCAATGAACGTACAAGGCTCGAAATG--TATGTTTGGAT 793
BSNT_02733___ 792 GAAATCCAAA-AATCCGTTTAAATTAGGCAAAGAGCTCTTAAAGCATGAA 840
.|||..|||| |||||...||||..|||.||.||.||..||||.||||||
BPUM_1589 794 TAAAAACAAAGAATCCTCATAAAAAAGGGAATGATCTGCTAAAACATGAA 843
BSNT_02733___ 841 CTTTCAATGAA-CTTATTGCTT-GAAGCTCTTTTTGGCAAAAGCTCTGCC 888
||....||||| ||.||| || ||..|..|.|||||.||||||||....
BPUM_1589 844 CTCGGTATGAATCTCATT--TTAGAGACGTTGTTTGGTAAAAGCTCCTTA 891
BSNT_02733___ 889 CAGTATGAATCA-CTTTATGAAAAAGGATATATTGACGAAACGTTTAGCT 937
||.|||||| || .|.|||||||||||.|..|||||.||.||.||.||||
BPUM_1589 892 CAATATGAA-CAGATGTATGAAAAAGGTTTAATTGATGAGACCTTCAGCT 940
BSNT_02733___ 938 TTGATTTTACTGCTGAATATGGGTTCGGTTTTGCGGCGATCGGCGGAGAT 987
..||||.|||.|..|||...||.|||||.||..||.|..|.||.|||||.
BPUM_1589 941 ACGATTATACAGAAGAAGGCGGCTTCGGCTTCACGTCAGTTGGTGGAGAC 990
BSNT_02733___ 988 ACGCCTGAGCCTGATCAATTGGCTGAAGACAT---------------TTC 1022
||...|||.|||||||||||||| |||...|| |||
BPUM_1589 991 ACAAATGATCCTGATCAATTGGC-GAAAGTATTAAAAGAAACCCTTCTTC 1039
BSNT_02733___ 1023 AAGCATGCTTTTGCGCGCCGGTGAAC-TGATTACTGCTGAAAAGATTGAA 1071
||||| ..|||| ||||..|.|..||.||.||.||.
BPUM_1589 1040 AAGCA---------------AAGAACTTGATCTCAGAAGAGAAAATCGAG 1074
BSNT_02733___ 1072 CTTGCCAGAAAGAAAAAGATTGGCACATTCTTAAAAGCGCTGAATTCCCC 1121
||.||..|.|||||.||.||.||||..||.||||||||..|||||||.||
BPUM_1589 1075 CTCGCGCGCAAGAAGAAAATCGGCAGCTTTTTAAAAGCCATGAATTCTCC 1124
BSNT_02733___ 1122 TGAATACATTGCCAATCAATTTACCCGTTATGCGTTCTTGGATATGAGTC 1171
||||||||||||.||.|||||.||.||.|||||.||.||.||.|||||..
BPUM_1589 1125 TGAATACATTGCGAACCAATTCACTCGATATGCATTTTTAGACATGAGCT 1174
BSNT_02733___ 1172 TGTTTGACGTTGTAACGGTACTCGAGCAGATTACC------CTCGAGGAT 1215
|.|||||.||.||.||..|.||.||.||||| || || ||.
BPUM_1589 1175 TATTTGATGTCGTGACCATGCTGGAACAGAT--CCAATTAACT----GAC 1218
BSNT_02733___ 1216 GTCCAGAACGTAATACAAGAGGAAATTGCTGCAG-ACAGACTGACTGTCT 1264
.|.|||.||.|..||.|.||.|||||||..|.|| ||.|| ||.||||.|
BPUM_1589 1219 ATTCAGCACATTTTAGAGGAAGAAATTGACGAAGAACGGA-TGTCTGTTT 1267
BSNT_02733___ 1265 GCAAGGTTGTTCCTAAATCATAA--- 1287
.|||.||.|||||.|||.||.||
BPUM_1589 1268 TCAAAGTCGTTCCGAAAACAAAATAA 1293
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.