Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02726 and BPUM_1584
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_02726.1.24716.seq
# -bsequence dna-align/BPUM_1584.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02726-BPUM_1584.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02726-BPUM_1584.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02726
# 2: BPUM_1584
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 155/250 (62.0%)
# Similarity: 155/250 (62.0%)
# Gaps: 50/250 (20.0%)
# Score: 448.5
#
#
#=======================================
BSNT_02726 1 ATGATTCTTTATAC---CGTGATGCCGCAGGAA---ATTGTGTTTGCAGA 44
||||| ||||||| |.| |||||..|.||| ||| |..||.||
BPUM_1584 1 ATGAT--TTTATACACACCT-ATGCCATATGAAGCCATT---TACGCGGA 44
BSNT_02726 45 ACAGAACCAAGAGA---CAAGCGCACATGAGCAAATTGAATAT-AAAGGT 90
.||||.|.|||| ||| ||.|.|.| |..|.||||| .||||.
BPUM_1584 45 --GGAACAAGGAGATCGCAA----ACTTCAAC-AGGTAAATATCCAAGGC 87
BSNT_02726 91 GTACCGCTTCTAGTCGAAATGAAAGGGAATGAAGCGGAAGTCATTCAAAT 140
||.||..||.|.||.||||||||||.|.|||||||.|||.||.|||||.|
BPUM_1584 88 GTTCCAGTTATGGTTGAAATGAAAGAGGATGAAGCAGAAATCGTTCAAGT 137
BSNT_02726 141 CATGAGCACCAATCCAATGCATTTTCTGCATCCGGACATTTCACCCGG-- 188
|||||||||.|||||||||.||||||||.|||..||..||.||||.||
BPUM_1584 138 CATGAGCACAAATCCAATGGATTTTCTGAATCAAGAGCTTGCACCAGGCA 187
BSNT_02726 189 -------------ACAA--AAGCTGAAATTAAA------CGTATAA---- 213
|||| |.|||..|||.||| |.|||.|
BPUM_1584 188 AGCGATTGAAGTTACAATTAGGCTCCAATCAAACCGACTCATATGAATGA 237
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