Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02725 and BPUM_1583

See Amino acid alignment / Visit BSNT_02725 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_02725___tepA.1.24716.seq
#    -bsequence dna-align/BPUM_1583___clpP1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02725___tepA-BPUM_1583___clpP1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02725___tepA-BPUM_1583___clpP1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02725___tepA
# 2: BPUM_1583___clpP1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     577/768 (75.1%)
# Similarity:   577/768 (75.1%)
# Gaps:          48/768 ( 6.2%)
# Score: 2190.0
# 
#
#=======================================

BSNT_02725___      1 -----------ATGGA-TCATCGTATG---GAAAACACAGAAGAAGAGCG     35
                                ||||| .||   .|||   |||||.|..|||.||.|||.
BPUM_1583___c      1 TTGAGGAAAGGATGGAGACA---AATGGACGAAAAAAATGAACAACAGCC     47

BSNT_02725___     36 T---------CCTGAA-AAAAATGATGCGAAGGACAGCATTATGAATAAA     75
                     |         ||.||| |||||          |||||||||||||..|||
BPUM_1583___c     48 TGAGCGAAAGCCAGAAGAAAAA----------GACAGCATTATGAGCAAA     87

BSNT_02725___     76 ATACAGCAGCTTGGTGAAACGACGCTTCCGCAGCTGCCCCAAGATACAAA    125
                     ||||||||||||||||||||..|..|.||.||||||||.|||||||||||
BPUM_1583___c     88 ATACAGCAGCTTGGTGAAACAGCCATACCACAGCTGCCGCAAGATACAAA    137

BSNT_02725___    126 TATTCATTGTCTGACCATTATCGGACAAATTGAAGGCCATGTTCAGCTTC    175
                     .||.|||||.||.||||||||.|||||||||||||||||..|.|||||||
BPUM_1583___c    138 CATCCATTGCCTTACCATTATTGGACAAATTGAAGGCCACATGCAGCTTC    187

BSNT_02725___    176 CTCCGCAAAACAAAACAACAAAATATGAACATGTCATCCCGCAGATTGTG    225
                     |.||.|||||.||||||||.|||||.||.||||||||.|||||.||.||.
BPUM_1583___c    188 CACCACAAAATAAAACAACCAAATACGAGCATGTCATTCCGCAAATCGTA    237

BSNT_02725___    226 GCAATTGAACAAAATCCCAAAATTGAA-GGCTTGCTGATCATATTAAATA    274
                     |||.|.||||||||.||.|||||.||| ||||| .|||||||.|||||||
BPUM_1583___c    238 GCAGTAGAACAAAACCCAAAAATCGAAGGGCTT-TTGATCATCTTAAATA    286

BSNT_02725___    275 CTGTCGGAGGAGATGTTGAAGCTGGTCTTGCAATAGCGGAAATGCTTGCA    324
                     |.||.||.||.|||||.|||||.||.||.||.||.||.|||||||||||.
BPUM_1583___c    287 CAGTAGGCGGCGATGTCGAAGCAGGACTAGCGATCGCAGAAATGCTTGCG    336

BSNT_02725___    325 TCTTTATCGAAACCGACCGTTTCTATCGTGCTTGGCGGGGGGCATTCCAT    374
                     ||||||||.||||||||.||.||.||.||.||||||||.||.||.|||||
BPUM_1583___c    337 TCTTTATCAAAACCGACTGTATCGATTGTACTTGGCGGCGGCCACTCCAT    386

BSNT_02725___    375 CGGCGTTCCGATTGCTGTATCCTGTGATTACAGCTATATCGCCGAAACAG    424
                     .||.||.||||||||||||||.||||||||...||||||.||.|||||||
BPUM_1583___c    387 TGGTGTCCCGATTGCTGTATCGTGTGATTATTCCTATATTGCGGAAACAG    436

BSNT_02725___    425 CAACGATGACGATTCATCCAGTTAGGCTCACCGGGCTGGTCATCGGGGTG    474
                     |.||.|||||.||||||||.||..|..|.||.||.||.||||||||.||.
BPUM_1583___c    437 CCACAATGACCATTCATCCTGTGCGTTTAACTGGTCTTGTCATCGGTGTC    486

BSNT_02725___    475 CCGCAAACGTTTGAATACTTGGATAAGATGCAAGAAAGAGTTGTTAAATT    524
                     ||.|||||.|||||||||||.|||||.|||||.||||||||..||||.||
BPUM_1583___c    487 CCCCAAACCTTTGAATACTTAGATAAAATGCAGGAAAGAGTCATTAACTT    536

BSNT_02725___    525 TGTGACAAGCCATTCCAATATAACCGAAGAGAAATTTAAAGAGCTAATGT    574
                     ||||||||||||.||||||||.||.|||||||||||||||||.||.||||
BPUM_1583___c    537 TGTGACAAGCCACTCCAATATTACAGAAGAGAAATTTAAAGAACTCATGT    586

BSNT_02725___    575 TTTCAAAAGGAAACTTAACACGCGATATCGGAACAAATGTAGTCGGTAAG    624
                     |.||||||||.||.||.|||.|.||.||.||.||||||||.||.|||.|.
BPUM_1583___c    587 TCTCAAAAGGCAATTTGACAAGGGACATAGGTACAAATGTTGTTGGTCAT    636

BSNT_02725___    625 GATGCAGTTAAATACGGATTGATCGATCACGCAGGCGGTGTCGGACAGGC    674
                     ||.||.|...||||||||.|.||..||.|.|.|||||||||.|||||.||
BPUM_1583___c    637 GAGGCGGCAGAATACGGACTCATGAATGAAGTAGGCGGTGTTGGACAAGC    686

BSNT_02725___    675 AATCAATAAACTGAATGAGCTCATCGACGAAGCAAGGAA----AGAAGAA    720
                     .||.||.||..||||||||||.||.|..|||  |.||.|    |.||..|
BPUM_1583___c    687 GATTAAAAAGTTGAATGAGCTGATTGGAGAA--AGGGCATCTCAAAACGA    734

BSNT_02725___    721 GGACGGATGATTCAATGA    738
                     ||  ||.||||.||||||
BPUM_1583___c    735 GG--GGCTGATCCAATGA    750


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02725 and BPUM_1583

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
