Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02705 and BPUM_1567

See Amino acid alignment / Visit BSNT_02705 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence dna-align/BSNT_02705___ylxP.1.24716.seq
#    -bsequence dna-align/BPUM_1567.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02705___ylxP-BPUM_1567.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02705___ylxP-BPUM_1567.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02705___ylxP
# 2: BPUM_1567
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     208/291 (71.5%)
# Similarity:   208/291 (71.5%)
# Gaps:          24/291 ( 8.2%)
# Score: 735.0
# 
#
#=======================================

BSNT_02705___      1 GTGATCGGATTTGCGGAGTGTGAATGCATCATTTATGATGCAGGATCGCT     50
                     .|||||||.|.|.|.||.|||||.|||||||||||||||||....||.||
BPUM_1567          1 ATGATCGGTTATACCGAATGTGAGTGCATCATTTATGATGCCTCCTCACT     50

BSNT_02705___     51 AAAAGAAAAGCGTGCCGTTCTGAAGCGGGTTTTAACCAGGGTTCAAAAC-     99
                     .||.|||||.|||||.|||||..||||..|.||.||.||       ||| 
BPUM_1567         51 GAAGGAAAAACGTGCGGTTCTTCAGCGTATATTGACAAG-------AACG     93

BSNT_02705___    100 ------AAGTTCAATGTTTCGATTTCGGAGATTGGCTATCAGGACACCTG    143
                           ||.||||||||..|.||..|.||.||.|..||.||||||||.||
BPUM_1567         94 CGCCATAAATTCAATGTAACCATGGCTGAAATGGATTACCAGGACACATG    143

BSNT_02705___    144 GCAAAGAACCAGCTTC----GGAATCGCCGCTGTTTCTTCCTCTCGCGTT    189
                     |||..|.|    ||||    ||||||||||.|.||||.||.|||||.|||
BPUM_1567        144 GCAGCGTA----CTTCAATTGGAATCGCCGTTATTTCCTCATCTCGGGTT    189

BSNT_02705___    190 CAAACAGAAAAAGAACTGCAACGCGTCCT-AGCGTTTATCGATTCTTTTC    238
                     |||...|||||.|||.||||.||.||..| ||| |||||.||||||||||
BPUM_1567        190 CAAGTGGAAAAGGAATTGCAGCGTGTTTTAAGC-TTTATTGATTCTTTTC    238

BSNT_02705___    239 CTGAAATTGAACGGACGATCACTAGGACAGAGTGGTTTTAA    279
                     |||||||||||||.||||||||.|..||.||||||||||||
BPUM_1567        239 CTGAAATTGAACGAACGATCACGAAAACTGAGTGGTTTTAA    279


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