Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02699 and BPUM_1563
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence dna-align/BSNT_02699___nusA.1.24716.seq
# -bsequence dna-align/BPUM_1563___nusA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02699___nusA-BPUM_1563___nusA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02699___nusA-BPUM_1563___nusA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02699___nusA
# 2: BPUM_1563___nusA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity: 890/1137 (78.3%)
# Similarity: 890/1137 (78.3%)
# Gaps: 42/1137 ( 3.7%)
# Score: 3466.5
#
#
#=======================================
BSNT_02699___ 1 ATGAGCAGTGAATTATTAGATGCTCTCACGATTCTTGAAAAAGAAAAAGG 50
|||||.|||||.||.||||||||.||.||..||||.||.|||||.||.||
BPUM_1563___n 1 ATGAGTAGTGAGTTGTTAGATGCCCTGACTGTTCTCGAGAAAGAGAAGGG 50
BSNT_02699___ 51 CATCAGTAAAGAAATTATCATCGAAGCAATCGAAGCTGCGTTAATTTCTG 100
.||.||||||||||||||.||.|||||.||.||||||||..|.|||||||
BPUM_1563___n 51 TATTAGTAAAGAAATTATTATTGAAGCGATAGAAGCTGCACTCATTTCTG 100
BSNT_02699___ 101 CTTATAAGCGGAATTTTAATCAAGCGCAAAATGTACGGGTGGATCTAAAC 150
|.||||||||.||.||||||||||||||||||||.||.||.|||.|||||
BPUM_1563___n 101 CATATAAGCGTAACTTTAATCAAGCGCAAAATGTTCGTGTTGATTTAAAC 150
BSNT_02699___ 151 CGTGAAACTGGCTCCATCCGTGTATTTGCAAGAAAAGATGTCGTTGACGA 200
||.|||||.||..|.||.||.|||||.||||||||||||||.||.||.||
BPUM_1563___n 151 CGCGAAACGGGAACAATTCGCGTATTCGCAAGAAAAGATGTTGTAGATGA 200
BSNT_02699___ 201 AGTATACGA------CCAGAGATTAGAGATCTCAATTGAAGA-GGCGCAG 243
|||.||.|| || |.||.||||| ||.||| |..|||
BPUM_1563___n 201 AGTGTATGATTCTCGCC------TTGAAATCTC---TGTAGATGATGCA- 240
BSNT_02699___ 244 GGC----ATCCATCCGGAATATATGGTCGGCGATGTCGTCGAAATCGAAG 289
|| ||..|.|||.|.||.|||||.||.||.|||||.|||||.||||
BPUM_1563___n 241 -GCCAATATAAACCCGAATTACATGGTAGGTGACGTCGTTGAAATTGAAG 289
BSNT_02699___ 290 TTACACCTAAGGATTTCGGGCGCATAGCTGCTCAAACAGCGAAGCAGGTC 339
|.||.||.||.||||||||.||.||.||.|||||.||.|||||.||.|||
BPUM_1563___n 290 TCACGCCAAAAGATTTCGGACGTATTGCAGCTCAGACGGCGAAACAAGTC 339
BSNT_02699___ 340 GTTACACAGCGTGTGCGCGAAGCTGAGCGCGGTGTGATTTATTCTGAATT 389
||.||.|||||.|||.|.|||||.|||||.||||||||.||..||||.||
BPUM_1563___n 340 GTGACGCAGCGAGTGAGAGAAGCAGAGCGAGGTGTGATCTACACTGAGTT 389
BSNT_02699___ 390 TATCGACCGTGAAGAAGACATCATGACAGGGATCGTCCAGCGTCTGGACA 439
||||||.||.||.||||||||.|||||.||.|||||.|||||..|.||||
BPUM_1563___n 390 TATCGATCGCGAGGAAGACATTATGACGGGAATCGTTCAGCGAATTGACA 439
BSNT_02699___ 440 ATAAATTTATCTACGTGTCTTTAGGCAAAATCGAAGCCTTGCTGCCGGTT 489
.||||||.||.||||||||..|.|||||||||||||||.|.||.|||||.
BPUM_1563___n 440 GTAAATTCATTTACGTGTCACTTGGCAAAATCGAAGCCCTTCTTCCGGTC 489
BSNT_02699___ 490 AATGAGCAAATGCCGAATGAAAGCTACAAACCTCATGACCGCATTAAGGT 539
||.||.||||||||||||||...|||||||||.|||||||||||||||||
BPUM_1563___n 490 AACGAACAAATGCCGAATGAGGACTACAAACCACATGACCGCATTAAGGT 539
BSNT_02699___ 540 ATATATCACAAAAGTAGAAAAAACAACGAAGGGCCCGCAGATTTATGTGT 589
.|.|||.||||||||.|||||||||||.||.||.||.||.||||||||||
BPUM_1563___n 540 GTTTATTACAAAAGTCGAAAAAACAACAAAAGGACCACAAATTTATGTGT 589
BSNT_02699___ 590 CAAGAACACATCCAGGCCTGTTAAAGCGTTTGTTTGAAATTGAAGTGCCT 639
|.||||||||||||||.||.|||||||||||.|||||||||||||||||.
BPUM_1563___n 590 CTAGAACACATCCAGGTCTTTTAAAGCGTTTATTTGAAATTGAAGTGCCA 639
BSNT_02699___ 640 GAAATTTATGATGGAACTGTCGAGCTAAAATCTGTTGCCAGAGAAGCCGG 689
||||||||||||||.|||||.|||||.|||||.|||||.||||||||.||
BPUM_1563___n 640 GAAATTTATGATGGTACTGTAGAGCTTAAATCGGTTGCTAGAGAAGCTGG 689
BSNT_02699___ 690 CGACCGTTCAAAAATTTCTGTTCGCACAGATGATCCTGACGTGGATCCTG 739
.||||||||.|||||.||||||||.||.|||||||||||.||.|||||.|
BPUM_1563___n 690 GGACCGTTCTAAAATCTCTGTTCGTACGGATGATCCTGATGTTGATCCAG 739
BSNT_02699___ 740 TCGGTTCATGCGTAGGGCCTAAAGGCCAGCGTGTGCAAGCAATCGTCAAT 789
|.|||||.||.||.||.||.|||||.||||||||.||||||||.|||||.
BPUM_1563___n 740 TAGGTTCTTGTGTTGGACCAAAAGGTCAGCGTGTACAAGCAATTGTCAAC 789
BSNT_02699___ 790 GAATTAAAAGGTGAAAAAATTGACATTGTCAACTGGTCCAGTGATCCTGT 839
||..|||||||.||||||||||||||||||.|.|||||.|.|||.||.||
BPUM_1563___n 790 GAGCTAAAAGGCGAAAAAATTGACATTGTCCATTGGTCTAATGACCCGGT 839
BSNT_02699___ 840 AGAATTTGTCGCGAATGCGCTCAGCCCTTCCAAAGTGCTTGATGTCATTG 889
.||||||||.||.|||||..|.||.||.||.|||||.||||||||.||||
BPUM_1563___n 840 TGAATTTGTTGCCAATGCATTAAGTCCATCAAAAGTACTTGATGTGATTG 889
BSNT_02699___ 890 TTAATGAAGAAGAAAAAGCGACAACTGTTATTGTTCCTGATTACCAGCTG 939
|.|||||||||||.||.||||||||.||.|||||.||.|||||.||||||
BPUM_1563___n 890 TCAATGAAGAAGATAAGGCGACAACAGTGATTGTCCCGGATTATCAGCTG 939
BSNT_02699___ 940 TCTCTGGCAATTGGCAAAAGAGGACAAAACGCACG-CTTAGCTGCTAAAC 988
||..|.||.|||||.||||||||.|||||.||.|| ||| ||.||.||.|
BPUM_1563___n 940 TCATTAGCCATTGGTAAAAGAGGTCAAAATGCTCGTCTT-GCAGCAAAGC 988
BSNT_02699___ 989 TGACAGGCTGGAAGATTGATATTAAGAGCGAAACGGACGCAAGAGAACTT 1038
||||..|||||||.|||||.|||||.||||||||.||.|||||.|||||.
BPUM_1563___n 989 TGACTAGCTGGAAAATTGACATTAAAAGCGAAACAGATGCAAGGGAACTC 1038
BSNT_02699___ 1039 GGAATCTATCCGAGAGAACTTGAAGAAGATG-ATGAGCCGCTCTTTAC-- 1085
||.|| |.|||.| ||||| ||||||...|| || ||||||.|
BPUM_1563___n 1039 GGTAT-TTTCCCA-AGAAC-TGAAGACTCTGAAT------CTCTTTTCTT 1079
BSNT_02699___ 1086 GGAGCCTGA------AACTGCTGAATCGGATGAATAA 1116
.|||.|||| |.|||..|||||.||.||||||
BPUM_1563___n 1080 AGAGGCTGAACCAGTAGCTGAGGAATCTGACGAATAA 1116
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