Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02693 and BPUM_1554
See
Amino acid alignment /
Visit
BSNT_02693 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence dna-align/BSNT_02693___dxr.1.24716.seq
# -bsequence dna-align/BPUM_1554___dxr.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02693___dxr-BPUM_1554___dxr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02693___dxr-BPUM_1554___dxr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02693___dxr
# 2: BPUM_1554___dxr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1189
# Identity: 875/1189 (73.6%)
# Similarity: 875/1189 (73.6%)
# Gaps: 74/1189 ( 6.2%)
# Score: 3064.5
#
#
#=======================================
BSNT_02693___ 1 TTGAAAAATATTTGTCTTTTAGGAGCAACAGGATCAATCGGCGAACAGAC 50
||||.|.||||||..||.|||||.||||||||||||||.||.|||||.||
BPUM_1554___d 1 TTGAGATATATTTCGCTATTAGGCGCAACAGGATCAATTGGAGAACAAAC 50
BSNT_02693___ 51 TCTTGATGTACTGCGTGCA-CATCAAGATCAATTTCAGCTGGTATCTATG 99
..|.|||||..|..| ||| ||.|.|||..|||||.|||||..|.|.|||
BPUM_1554___d 51 ATTAGATGTGATTAG-GCAGCACCCAGACAAATTTAAGCTGAAAGCCATG 99
BSNT_02693___ 100 TCGTTTGGCAGAAATATTGATAAGGCCGTTCCAATGATTGAGGTCTTTCA 149
.||||||||.|.|||.|.||.||||||.|.|||||.|||||....|||||
BPUM_1554___d 100 ACGTTTGGCCGGAATGTAGACAAGGCCATACCAATTATTGAACAGTTTCA 149
BSNT_02693___ 150 GCC-GAAGTTTGTC----TCTGTCGGTGATCTGGATACATATCATAAATT 194
||| ||| |||||| .|| |..|||| .||..|.|||||.|...|
BPUM_1554___d 150 GCCTGAA-TTTGTCGGATGCT-TAAGTGA---AGAGGCCTATCACACGCT 194
BSNT_02693___ 195 AAAACAAATGTCTTTTTCTTTTGAAT------GCCAAATCGGGTTG--GG 236
| |||.||| .|||.||||||| .|.|||| ||.|| ||
BPUM_1554___d 195 A----AAAGGTC--ATTCATTTGAATACGATGTCAAAAT--GGCTGCTGG 236
BSNT_02693___ 237 AGAAGAAG--GACTGATAGAAGCAGCA----GTGATGGAGGAGGTTGACA 280
.||.|||| .|| ||.||||||||| .|||||.| ||.|||.
BPUM_1554___d 237 TGATGAAGCCAAC--ATCGAAGCAGCAATTTATGATGCA----GTGGACG 280
BSNT_02693___ 281 TTGTTGTCAACG-CTTTGCTTGGAAGCGTCGGTCTTATCCCGACGTTAAA 329
||||.|||||.| |.||| |.|||||.|||||.|||.|.||.||.|||||
BPUM_1554___d 281 TTGTGGTCAATGCCCTTG-TCGGAAGTGTCGGGCTTGTTCCAACATTAAA 329
BSNT_02693___ 330 GGCGATTGAACAGAAAAAAACAATTGCGCTTGCAAATAAGGAAACTCTTG 379
|||.||||||||.|||||.||||||||.|||||||||||||||||.||.|
BPUM_1554___d 330 GGCCATTGAACAAAAAAAGACAATTGCACTTGCAAATAAGGAAACACTGG 379
BSNT_02693___ 380 TCACTGCAGGGCATATAGTAAAAGAACATGCTAAGAAATATGATGTTCCG 429
|.||.||.||.||||||||||||||..|.||.||.|.|||||||||.||.
BPUM_1554___d 380 TGACAGCTGGTCATATAGTAAAAGAGTACGCGAAAACATATGATGTACCT 429
BSNT_02693___ 430 CTGCTGCCTGTTGACAGTGAGCATTCAGCCATTTTTCAA-GCTCTTCAAG 478
.|.||.|||||.||.|||||||||||.||.||||||||| || ||.||||
BPUM_1554___d 430 TTACTTCCTGTCGATAGTGAGCATTCCGCTATTTTTCAATGC-CTGCAAG 478
BSNT_02693___ 479 GCGAACAGGTTAAAAACATTGAACGCCTCATCATTACGGCATCCGGCGGA 528
|.|||||.|.||||||||||||||||.|.|||.|.||.||.||.||.||.
BPUM_1554___d 479 GTGAACAAGCTAAAAACATTGAACGCTTAATCGTGACAGCTTCAGGTGGT 528
BSNT_02693___ 529 AGTTTTCGGGACAAGACGCGGGAGGAGCTCGAATCAGTAACTGTTGAAGA 578
|||||.||.||.||.|..||....||.||.|||...||.||.||||||||
BPUM_1554___d 529 AGTTTCCGAGATAAAAAACGAACTGAACTTGAAGGTGTTACGGTTGAAGA 578
BSNT_02693___ 579 TGCATTAAAACATCCAAACTGGTCAATGGGTGCAAAAATTACAATTGATT 628
.|||.|.||.||.|||||||||||||||||.||.||||||||.|||||||
BPUM_1554___d 579 AGCACTGAACCACCCAAACTGGTCAATGGGAGCGAAAATTACCATTGATT 628
BSNT_02693___ 629 CGGCTACAATGATGAATAAGGGATTAGAGGTGATCGAGGCACACTGGCTT 678
|.||.||.|||||||||||.||..|.|||||.||.|||||.||.|||.|.
BPUM_1554___d 629 CAGCGACGATGATGAATAAAGGGCTCGAGGTCATTGAGGCGCATTGGTTG 678
BSNT_02693___ 679 TTCGATGTACCTTATGAACAAATTGATGTGGTTTTACATAAGGAGAGCAT 728
||.|||.||||.||||||||||||||||||.|.||||||||.||||||||
BPUM_1554___d 679 TTTGATATACCATATGAACAAATTGATGTGCTGTTACATAAAGAGAGCAT 728
BSNT_02693___ 729 CATCCATTCAATGGTTGAGTTCCATGATAAAAGTGTGATCGCACAGCTCG 778
.||||||||.|||||.||.||.||.||.|||||.||.||.||.|||.|.|
BPUM_1554___d 729 TATCCATTCGATGGTGGAATTTCACGACAAAAGCGTCATGGCTCAGTTAG 778
BSNT_02693___ 779 GAACTCCGGATATGAGAGTCCCCATTCAATATGCGCTCACTTATCCTGAC 828
|.||.||.||.||||||||.||||||||||||||.|||||.||.||||||
BPUM_1554___d 779 GGACACCTGACATGAGAGTGCCCATTCAATATGCACTCACATACCCTGAC 828
BSNT_02693___ 829 CGATTGCCATTACCAGATGCGAAA--AGGCTTGAA--TTATGGGAAATCG 874
.|...||||||||||||.|||||| | ||||| || |||||.||.|
BPUM_1554___d 829 AGGGCGCCATTACCAGAAGCGAAATCA---TTGAACCTT-TGGGAGATTG 874
BSNT_02693___ 875 G-CAGCCTT-CATTTTGAGAAAGCTGATTTTGACAGGTTCCGATGCTTAC 922
| || .|| .||||..|.|||||.|||||||||||||..||.|||||||
BPUM_1554___d 875 GACA--ATTGAATTTCCAAAAAGCGGATTTTGACAGGTATCGTTGCTTAC 922
BSNT_02693___ 923 AATTTGCTTTTGAATCAGGTAAAATAGGAGGAACAATGCCGACAGTGCTA 972
|.|||||||.|||||||||||||||||||||.||||||||..|.|||||.
BPUM_1554___d 923 ATTTTGCTTATGAATCAGGTAAAATAGGAGGGACAATGCCTGCTGTGCTC 972
BSNT_02693___ 973 AATGCGGCAAATGAAGTAGCTGTCGCTGCCTTTTTAGCT----GGCAAGA 1018
|||||.|||||||||.|.||.||||.||||||| || |||||..
BPUM_1554___d 973 AATGCAGCAAATGAAATGGCAGTCGATGCCTTT----CTGAAAGGCAAAG 1018
BSNT_02693___ 1019 TACCGTTTTTGGCTATTGAAGACTGTATCGAAAAGGCACTAACCCGCCAT 1068
||.||||..||...||||||||.|..||.|||||||||||.|.|.|.|||
BPUM_1554___d 1019 TAACGTTCCTGCAAATTGAAGAATTGATTGAAAAGGCACTGAACAGACAT 1068
BSNT_02693___ 1069 CA----ATTACTGAAAAAACCGAGCCTGGCGGACATTCAAGAAGTGGACA 1114
|| |||.| ||..||.||..||...||.||.||.||||||||||
BPUM_1554___d 1069 CATGTGATTTC----AACGCCTAGTTTGCAAGATATCCATGAAGTGGACA 1114
BSNT_02693___ 1115 AAGATACCCGGGGATACG-TCAATTCAATACTCACATAA 1152
||||.||.||.|..|..| |||| |||||.|||||||||
BPUM_1554___d 1115 AAGAGACACGAGACTTTGTTCAA-TCAATCCTCACATAA 1152
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.