Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02689 and BPUM_1551
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence dna-align/BSNT_02689___frr.1.24716.seq
# -bsequence dna-align/BPUM_1551___frr.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02689___frr-BPUM_1551___frr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02689___frr-BPUM_1551___frr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02689___frr
# 2: BPUM_1551___frr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity: 447/561 (79.7%)
# Similarity: 447/561 (79.7%)
# Gaps: 6/561 ( 1.1%)
# Score: 1743.0
#
#
#=======================================
BSNT_02689___ 1 GTGTCAAAAGAAGTATT-AACTCAAACAAAAGAAAAAATGGAAAAAGCAA 49
||||||||||||||||| ||| |||||.||||||||||||||||||||..
BPUM_1551___f 1 GTGTCAAAAGAAGTATTGAAC-CAAACGAAAGAAAAAATGGAAAAAGCCG 49
BSNT_02689___ 50 TTGCTGCTTATCAG-CGCGAATTGGCTACTGTACGCGCAGGCCGTGCAAA 98
||...||.|| |.| ||.|||.|.||.|||||.||.||.|||.|.|||||
BPUM_1551___f 50 TTCAAGCATA-CGGACGAGAACTTGCAACTGTTCGTGCGGGCAGAGCAAA 98
BSNT_02689___ 99 TCCATCATTATTAGATAAAGTAACGGTTGAATATTACGGAGCGCAGACAC 148
|.|.|||||..|.||||||||.||||||||.|||||.||.||.||.||||
BPUM_1551___f 99 TGCTTCATTGCTTGATAAAGTGACGGTTGATTATTATGGTGCACAAACAC 148
BSNT_02689___ 149 CTTTAAATCAGTTGTCTTCTATTAACGTGCCTGAAGCTCGTATGCTCGTT 198
|..||||.||..|..|.||.||.|..|||||.|||||.||||||||..||
BPUM_1551___f 149 CACTAAACCAAATCGCGTCAATCACAGTGCCAGAAGCACGTATGCTAATT 198
BSNT_02689___ 199 ATCACACCATACGACAAAACAGCAATCGGCGATATCGAAAAAGCGATTTT 248
||||||||.||.||.||||||||.|||||.||||||||||||.| |.|..
BPUM_1551___f 199 ATCACACCTTATGATAAAACAGCTATCGGTGATATCGAAAAATC-AATCC 247
BSNT_02689___ 249 AAAAG-CTGATTTAGGTCTTACACCAACAAGTGACGGCAATATGATTCGA 297
||||| |||||.|.|||.|.||.||||||||||||||.|||.||||.||.
BPUM_1551___f 248 AAAAGTCTGATCTTGGTATCACGCCAACAAGTGACGGAAATGTGATCCGT 297
BSNT_02689___ 298 ATTGCAATTCCGGCACTAACAGAAGAGAGACGGAAAGAATTAGTGAAAGT 347
|||||||||||.||||||||||||||.|||||.|||||..|.|||||.||
BPUM_1551___f 298 ATTGCAATTCCTGCACTAACAGAAGAAAGACGTAAAGAGCTTGTGAAGGT 347
BSNT_02689___ 348 TGTAAAAAAATACGCTGAAGAAGCAAAAGTAGCTGTTCGTAACGTTCGCC 397
|||||.||||||..|.||||||||||||||||||||||||||.|||||.|
BPUM_1551___f 348 TGTAAGAAAATATTCAGAAGAAGCAAAAGTAGCTGTTCGTAATGTTCGTC 397
BSNT_02689___ 398 GTGATGCTAACGATGATCTCAAAAAACTTGAGAAAAACGGAGACATTACT 447
|||||||.||||||||..|.|||||.||.||||||||.||.||.||.|||
BPUM_1551___f 398 GTGATGCAAACGATGAGTTGAAAAAGCTCGAGAAAAATGGTGAGATCACT 447
BSNT_02689___ 448 GAGGATGAACTGCGTGCTTCCACTGAAGACGTTCAAAAACTGACAGATGA 497
||.||||||.|..|..|.||.||.||.||.|||||||||.||||||||||
BPUM_1551___f 448 GAAGATGAATTAAGATCATCAACAGAGGATGTTCAAAAATTGACAGATGA 497
BSNT_02689___ 498 ATATGTGTCAAAAATTGACAGTGTCACAAAAGACAAAGAAAAAGAAATCA 547
||||||..|.||||||||....||.|..|||||.||||||||||||||||
BPUM_1551___f 498 ATATGTCGCTAAAATTGATGACGTGATGAAAGATAAAGAAAAAGAAATCA 547
BSNT_02689___ 548 TGGAAGTTTAA 558
|||||||||||
BPUM_1551___f 548 TGGAAGTTTAA 558
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