Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02687 and BPUM_1549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:17
# Commandline: needle
# -asequence dna-align/BSNT_02687___tsf.1.24716.seq
# -bsequence dna-align/BPUM_1549___tsf.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02687___tsf-BPUM_1549___tsf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02687___tsf-BPUM_1549___tsf.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02687___tsf
# 2: BPUM_1549___tsf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 891
# Identity: 736/891 (82.6%)
# Similarity: 736/891 (82.6%)
# Gaps: 18/891 ( 2.0%)
# Score: 3056.5
#
#
#=======================================
BSNT_02687___ 1 ATGGCAATTACTGCACAGCAAGTAAAAGAACTGCGTGAAAAAACTGGCGC 50
|||||.||||||||.||...|||.||||||||||||.||||||||||.||
BPUM_1549___t 1 ATGGCTATTACTGCTCAATTAGTTAAAGAACTGCGTCAAAAAACTGGTGC 50
BSNT_02687___ 51 GGGCATGATGGATTGTAAAAAAGCGTTAACTGAAACTGACGGAGATATGG 100
.||.||||||||.|||||||||||||||||.||||||||.||.||.||.|
BPUM_1549___t 51 AGGTATGATGGACTGTAAAAAAGCGTTAACAGAAACTGATGGTGACATCG 100
BSNT_02687___ 101 ACAAAGCAATTGACCTTTTAAGAGAAAAAGGGATTGCAAAAGCAGCGAAA 150
||||||||||.||.|||.|||||||||||||.|||||||||||.||||||
BPUM_1549___t 101 ACAAAGCAATCGATCTTCTAAGAGAAAAAGGAATTGCAAAAGCTGCGAAA 150
BSNT_02687___ 151 AAAGCTGACCGTATCGCAGCAGAAGGTTCTACTCTTATTAAAACTGACGG 200
|||||.||||||||.||.||||||||.|..||||||||.||||||||.||
BPUM_1549___t 151 AAAGCAGACCGTATTGCTGCAGAAGGATTAACTCTTATCAAAACTGATGG 200
BSNT_02687___ 201 CAACAAAGGCGTTATCCTAGAAGTAAACTCTGAAACTGATTTCGTTGCGA 250
|||||.||||||.|||||||||||.||||||||.||||||||||||||||
BPUM_1549___t 201 CAACACAGGCGTGATCCTAGAAGTGAACTCTGAGACTGATTTCGTTGCGA 250
BSNT_02687___ 251 AAAACGAAGGTTTTAAAGAGCTTCTTAAC--ACTTTAGCTGACCACCTTC 298
||||||||||.||..||...||||||||| |||| |||||.||..|.|
BPUM_1549___t 251 AAAACGAAGGATTCCAATCACTTCTTAACGAACTT--GCTGATCATTTGC 298
BSNT_02687___ 299 TTGC----AAACACGC--CAGCTGATGTTGAAGAAGC-AATGGGCCAAAA 341
|.|| ||||..|| || .|||||||||| .|||...| .||
BPUM_1549___t 299 TAGCTGCTAAACCTGCAACA------ATTGAAGAAGCTCATGCTTC-TAA 341
BSNT_02687___ 342 AATGGAAAATGGCTCAACTGTTGAAGAGTACATCACAAGCGCAGTTGCTA 391
|||||||||.||.|||||.|||||||||.|.||.|||...|||.||||.|
BPUM_1549___t 342 AATGGAAAACGGTTCAACAGTTGAAGAGCATATTACATCTGCAATTGCGA 391
BSNT_02687___ 392 AAATCGGTGAGAAAATCACTCTTCGCCGCTTTACAGTTCTTACAAAAGAC 441
|||||||.||||||||||||||.||.||.||..|.|||.|.||||||||.
BPUM_1549___t 392 AAATCGGAGAGAAAATCACTCTACGTCGTTTCTCTGTTATCACAAAAGAA 441
BSNT_02687___ 442 GACAGCTCTGCATTCGGTGCTTACCTTCACATGGGCGGCCGCATCGGTGT 491
||.|.|.|.|||||||||.|||||.|.|||||||||||.|||||||||||
BPUM_1549___t 442 GATAACGCAGCATTCGGTTCTTACTTACACATGGGCGGACGCATCGGTGT 491
BSNT_02687___ 492 ATTAACTGTTCTCAACGGTACAACTGATGAAGAAACTGCGAAAGATATCG 541
.|||.|||||||.|||||.||||||||.|||||...|||.|.|||.||||
BPUM_1549___t 492 GTTAGCTGTTCTTAACGGAACAACTGACGAAGAGCTTGCAAGAGACATCG 541
BSNT_02687___ 542 CAATGCACGTTGCTGCGGTTAACCCTCGTTACATTTCTCGTGATCAAGTA 591
||||||||||||||||.||.||||||...||||||||||||||.|||||.
BPUM_1549___t 542 CAATGCACGTTGCTGCTGTAAACCCTAAATACATTTCTCGTGACCAAGTG 591
BSNT_02687___ 592 TCTGAAGAAGAAACAAATCATGAGCGTCAAATCTTAACTCAGCAAGCCCT 641
||.|||||||||.||||.|.||||||..||.|.|||||.||||||||.||
BPUM_1549___t 592 TCAGAAGAAGAAGCAAACCGTGAGCGCGAAGTATTAACACAGCAAGCGCT 641
BSNT_02687___ 642 CCAAGAAGGCAAACCTGAAAACATCGTAGCGAAAATGGTTGAAGGCCGTC 691
.||||||||.||||||||||||||||||||.||||||||.||||||||||
BPUM_1549___t 642 ACAAGAAGGAAAACCTGAAAACATCGTAGCTAAAATGGTAGAAGGCCGTC 691
BSNT_02687___ 692 TGAACAAATTCTTCGAAGAAATTTGTCTATTAGACCAAGCGTTCGTTAAA 741
|.|||||||||||||||||||||||..||.|.||||||||.|||||||||
BPUM_1549___t 692 TAAACAAATTCTTCGAAGAAATTTGCTTACTTGACCAAGCTTTCGTTAAA 741
BSNT_02687___ 742 AACCCAGATGAAAAAGTGAAACAAGTTATTGCAGCGAAAAACGCTACTGT 791
||||||||||||||||||||||||||..|.||.|||||||||||.|...|
BPUM_1549___t 742 AACCCAGATGAAAAAGTGAAACAAGTAGTAGCTGCGAAAAACGCAAGCAT 791
BSNT_02687___ 792 TCAAACTTTTGTCCGCTATGAAGTTGGAGAAGGCATCGAAAAACGTCAAG 841
||||||||.|||.|||||||||||.||.|||||.|||||.||.|||||||
BPUM_1549___t 792 TCAAACTTATGTTCGCTATGAAGTGGGCGAAGGTATCGAGAAGCGTCAAG 841
BSNT_02687___ 842 AAAACTTTGCTGAAGAAGTAATGAACCAAGTGAAAAAATAA 882
|.|||||||||||||||||.||||.||||||||||||||||
BPUM_1549___t 842 ACAACTTTGCTGAAGAAGTTATGAGCCAAGTGAAAAAATAA 882
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