Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02664 and BPUM_1532
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:16
# Commandline: needle
# -asequence dna-align/BSNT_02664___cheY.1.24716.seq
# -bsequence dna-align/BPUM_1532___cheY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02664___cheY-BPUM_1532___cheY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02664___cheY-BPUM_1532___cheY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02664___cheY
# 2: BPUM_1532___cheY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 290/364 (79.7%)
# Similarity: 290/364 (79.7%)
# Gaps: 2/364 ( 0.5%)
# Score: 1142.0
#
#
#=======================================
BSNT_02664___ 1 ATGGC-ACATAGAATTTTAATTGTAGATGACGCAGCATTTATGAGAATGA 49
||||| || ||...|.|||||.||||||||.||||||||.||||||||||
BPUM_1532___c 1 ATGGCTAC-TAAGGTATTAATCGTAGATGATGCAGCATTCATGAGAATGA 49
BSNT_02664___ 50 TGATTAAAGATATTTTGGTTAAAAATGGTTTTGAAGTTGTGGCGGAAGCT 99
||||.||.||||||.|.||.|||||.||.|||||.||.||.|..|||||.
BPUM_1532___c 50 TGATAAAGGATATTCTTGTAAAAAACGGATTTGATGTAGTAGGAGAAGCA 99
BSNT_02664___ 100 GAAAATGGAGCACAAGCGGTAGAGAAATATAAAGAGCATTCACCTGACCT 149
|||||.||.||.|||||.||.||.||.||.|||||....||.||.||.||
BPUM_1532___c 100 GAAAACGGTGCTCAAGCAGTTGAAAAGTACAAAGAAACGTCTCCAGATCT 149
BSNT_02664___ 150 TGTTACTATGGATATCACGATGCCAGAAATGGATGGTATTACAGCATTAA 199
|||.||.|||||||||||.||||||||||||||.||.||.||||||.|||
BPUM_1532___c 150 TGTCACAATGGATATCACAATGCCAGAAATGGACGGGATCACAGCACTAA 199
BSNT_02664___ 200 AAGAAATTAAACAAATTGATGCGCAGGCAAGAATCATCATGTGTTCTGCT 249
|||||||||||||||||||.||....||||.||||||||||||||||||.
BPUM_1532___c 200 AAGAAATTAAACAAATTGACGCTTCTGCAAAAATCATCATGTGTTCTGCA 249
BSNT_02664___ 250 ATGGGACAGCAATCAATGGTTATTGATGCCATTCAGGCCGGCGCTAAGGA 299
|||||.|||||.||||||||||||||.||.||.||.||.||.||.||.||
BPUM_1532___c 250 ATGGGGCAGCAGTCAATGGTTATTGACGCAATCCAAGCAGGTGCAAAAGA 299
BSNT_02664___ 300 TTTCATTGTGAAACCTTTCCAAGCTGACCGTGTGCTTGAAGCAATCAACA 349
.||.||.|||||.||.||||||||.|||||.||.|||||||||||.||.|
BPUM_1532___c 300 CTTTATCGTGAAGCCGTTCCAAGCAGACCGCGTACTTGAAGCAATTAATA 349
BSNT_02664___ 350 AAACATTAAGTTAA 363
||||.|||.|.|||
BPUM_1532___c 350 AAACGTTAGGCTAA 363
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