Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02661 and BPUM_1530

See Amino acid alignment / Visit BSNT_02661 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_02661___fliM.1.24716.seq
#    -bsequence dna-align/BPUM_1530___fliM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02661___fliM-BPUM_1530___fliM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02661___fliM-BPUM_1530___fliM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02661___fliM
# 2: BPUM_1530___fliM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1007
# Identity:     778/1007 (77.3%)
# Similarity:   778/1007 (77.3%)
# Gaps:          16/1007 ( 1.6%)
# Score: 2963.5
# 
#
#=======================================

BSNT_02661___      1 ATGTCAGGAGAAGTTCTCTCCCAAAATGAAATAGATGCACTGCTTTCTGC     50
                     ||||||||||||||.||.|||||.|||||.||.||||||.|..|.||.||
BPUM_1530___f      1 ATGTCAGGAGAAGTGCTTTCCCAGAATGAGATCGATGCATTATTATCCGC     50

BSNT_02661___     51 AATATCAACAGGTGAAATGGACGCTGAAGAGCTGAAAAAAGAAGAAAAAG    100
                     .|||||.|||||.||||||||.|||||||||||||||||||||| |||.|
BPUM_1530___f     51 CATATCTACAGGCGAAATGGATGCTGAAGAGCTGAAAAAAGAAG-AAACG     99

BSNT_02661___    101 A-GAAGAAAGTCAAGGTTTATGATTTCAAACGTGCGCTGCGGTTTTCTAA    149
                     | |||.|||||.|||||.||||||||.||||||||.|||||.|||||.||
BPUM_1530___f    100 ACGAAAAAAGTAAAGGTGTATGATTTTAAACGTGCACTGCGCTTTTCGAA    149

BSNT_02661___    150 GGATCAGATCCGCAGTTTAACGAGAATTCATGACAATTTTGCAAGACTTC    199
                     .||.|||||.||.||||||||.||.|||||.||.||.||.||.|||||.|
BPUM_1530___f    150 AGACCAGATTCGAAGTTTAACAAGGATTCACGATAACTTCGCTAGACTGC    199

BSNT_02661___    200 TTACCACTCATTTTTCTGCTCAGCTCAGAACCTATATTCACATATCTGTC    249
                     |.|||||.||.|||||.||||||||.|||.|.||||||||.||..|||||
BPUM_1530___f    200 TCACCACACACTTTTCAGCTCAGCTAAGATCATATATTCAAATTACTGTC    249

BSNT_02661___    250 AGTTCTGTTGACCAGGTCCCGTATGAGGAATTTATCAGATCGATCCCGAA    299
                     ||.||.||||||||.||.||.||.||.||.|||||..|.|||||.||.||
BPUM_1530___f    250 AGCTCGGTTGACCAAGTACCATACGAAGAGTTTATTCGTTCGATTCCTAA    299

BSNT_02661___    300 CATGACGATTCTGAATC-TATTTGATGTCCATCCGATGGAAGGCAGAATT    348
                     .||||| |||.|.||.| |||||.|||||..||||.|.|||||.|||||.
BPUM_1530___f    300 TATGAC-ATTATTAAACTTATTTTATGTCAGTCCGCTTGAAGGAAGAATC    348

BSNT_02661___    349 ATGATGGAGGTCAACCCCACGATAGCTTATACGATGATGGATCGGGTCAT    398
                     |||.|.||.||.|||||.||.||.|..|||.|.||||||||..||.|.||
BPUM_1530___f    349 ATGCTTGAAGTGAACCCAACAATCGGCTATGCCATGATGGACAGGCTGAT    398

BSNT_02661___    399 GGGCGGGATTGGAATCAGTCATAACAAGGTTGACAG------TTTGACAG    442
                     ||||||||||||.||.||||||||.||    |||||      ||  ||||
BPUM_1530___f    399 GGGCGGGATTGGCATTAGTCATAATAA----GACAGAATCACTT--ACAG    442

BSNT_02661___    443 AAATTGAAACAAAAATCATTTCTAATTTATTTGAAAATGCACTGGGTAAT    492
                     |.||.||||||||.||.||.||.||..|.|||||....||..|||..|||
BPUM_1530___f    443 AGATCGAAACAAAGATTATCTCAAACATGTTTGAGGGAGCTTTGGAAAAT    492

BSNT_02661___    493 TATAAAGAAGCTTGGCAGTCAATTGCTGATATTGAACCGGAAATGACTGA    542
                     ||||.||||||.||||||||.||..|||||||.||.||.||||||.|.||
BPUM_1530___f    493 TATAGAGAAGCGTGGCAGTCCATAACTGATATCGAGCCTGAAATGGCAGA    542

BSNT_02661___    543 GTTTGAAGTGAATCCGCAATTTGTTCAGATGGTATCTCCTAATGAAACAG    592
                     .||.||.||.|||||.||.|||||.||.|||||.||.||.||.|||||||
BPUM_1530___f    543 TTTCGAGGTAAATCCCCAGTTTGTACAAATGGTGTCACCAAACGAAACAG    592

BSNT_02661___    593 TCGTGGTGATCTCGCTCAATACTCAAATTGGTGAAATCAGCGGTGTCATT    642
                     |.||.||.||.||.||.|||||.|||||||||||..|.|||||.||.|||
BPUM_1530___f    593 TTGTCGTCATTTCTCTTAATACACAAATTGGTGAGGTAAGCGGGGTTATT    642

BSNT_02661___    643 AATCTCTGTATCCCGCATATCGTACTCGAGCCGCTCATACCGAAGCTTTC    692
                     ||.||.|||||.||.|||.|.|||.|.|||||..|.||.|||||.||.||
BPUM_1530___f    643 AACCTATGTATTCCTCATGTTGTATTAGAGCCTATTATTCCGAAACTGTC    692

BSNT_02661___    693 AGTCCACTATTGGATGCAATCAGACCGAAATGAGCCAAAGCCTGAGGAAA    742
                     .||.||.||.||||||||.||.||.||||||||.|||||.|...|.||||
BPUM_1530___f    693 TGTACATTACTGGATGCAGTCTGAACGAAATGAACCAAAACAACAAGAAA    742

BSNT_02661___    743 CAAAGTCGCTTGAAAAACGTATCATGACAGCACAAATACCTGTCGTGGCC    792
                     |||||.|..||||||||||.||.|||||.|||.|||||||.||.||.||.
BPUM_1530___f    743 CAAAGGCCATTGAAAAACGGATAATGACGGCAAAAATACCGGTAGTCGCA    792

BSNT_02661___    793 GAGCTCGGCACATCTGAACTGACGATAGAAGAGTTTTTAAGTTTAGAAGT    842
                     |||||.||...|||.|||.|||||.|.|||||||||||.|.|||.|||.|
BPUM_1530___f    793 GAGCTAGGGGAATCGGAAATGACGGTGGAAGAGTTTTTGAATTTGGAAAT    842

BSNT_02661___    843 CGGAGACTGCATAACTTTGGACAAATCAGTCACGGATCCTCTTACTGTAT    892
                     .||.|||||.||..|.|||||||||.||||.|..|..|||||||||||..
BPUM_1530___f    843 TGGTGACTGTATTGCCTTGGACAAACCAGTAAATGCGCCTCTTACTGTTA    892

BSNT_02661___    893 TGGTCGGAGATAAGCCGAAATTTTTAGGACAAGCCGGCCGGGTGAATCGA    942
                     ||||||||.||||.||||||||.||.|||||.||||||||.||||||||.
BPUM_1530___f    893 TGGTCGGAAATAAACCGAAATTCTTGGGACAGGCCGGCCGCGTGAATCGG    942

BSNT_02661___    943 AAACAGGCAGTGCAAATTTTAGATCACGACATAAGAGGTGAACAAGATGG    992
                     ||||||||..|.||||||.|||||||||||||||||||||||.|||||||
BPUM_1530___f    943 AAACAGGCGATTCAAATTCTAGATCACGACATAAGAGGTGAAGAAGATGG    992

BSNT_02661___    993 AGAATAA    999
                     |||||||
BPUM_1530___f    993 AGAATAA    999


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02661 and BPUM_1530

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
