Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02657 and BPUM_1528
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:15
# Commandline: needle
# -asequence dna-align/BSNT_02657.1.24716.seq
# -bsequence dna-align/BPUM_1528.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02657-BPUM_1528.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02657-BPUM_1528.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02657
# 2: BPUM_1528
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 160/223 (71.7%)
# Similarity: 160/223 (71.7%)
# Gaps: 14/223 ( 6.3%)
# Score: 540.0
#
#
#=======================================
BSNT_02657 1 ATGATTAAAGTAACCCGTTTGAACGG----GCAGCCCTTTACACTGAATG 46
||||||.|||||||..|.|||||.|| |.| ||||..|||||.|
BPUM_1528 1 ATGATTGAAGTAACAAGATTGAATGGCAAAGGA----TTTATGCTGAACG 46
BSNT_02657 47 CGCTATTTATTGAACAGATTGAATGTTTTCCGGATACTACAATTACTCTG 96
|.||...|||.||.||.||.|||.|.|||||.||.||.||.|||||..|.
BPUM_1528 47 CTCTCCATATCGAGCAAATCGAAAGCTTTCCAGACACGACCATTACATTA 96
BSNT_02657 97 TCAAATGGTAAGAAGTTTGTAGTAAAAGAAGATGAAGA--AGCTGTTCTG 144
.|.|||||.|||||.||.|||||.||||||.||||||| ||| |||..
BPUM_1528 97 GCCAATGGAAAGAAATTCGTAGTGAAAGAAAATGAAGATCAGC--TTCAA 144
BSNT_02657 145 GAAAAGATCGCAGCTTTCTACCGAAAAATACAAAT-ATTTGCAATGGATC 193
||.||.|||....||||||||.|||||||.|||.| |||| ||.||.|||
BPUM_1528 145 GAGAAAATCATTTCTTTCTACAGAAAAATCCAAGTCATTT-CATTGAATC 193
BSNT_02657 194 AAGGAATAGAGGAACCGGAATGA 216
||||||||||||||...||||||
BPUM_1528 194 AAGGAATAGAGGAATTTGAATGA 216
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