Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02656 and BPUM_1527

See Amino acid alignment / Visit BSNT_02656 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_02656___flgG.1.24716.seq
#    -bsequence dna-align/BPUM_1527___flgG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02656___flgG-BPUM_1527___flgG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02656___flgG-BPUM_1527___flgG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02656___flgG
# 2: BPUM_1527___flgG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 876
# Identity:     558/876 (63.7%)
# Similarity:   558/876 (63.7%)
# Gaps:         165/876 (18.8%)
# Score: 1649.0
# 
#
#=======================================

BSNT_02656___      1 ATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAGAACTTTCAAAC     50
                     ||||||||.||||||||.||.|||||.||.||.|||||.|||||.|||.|
BPUM_1527___f      1 ATGTTACGCTCACTTTACTCAGGAATTAGTGGAATGAAAAACTTCCAATC     50

BSNT_02656___     51 AAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGAT    100
                     |||..|.||.||..|.|..||||||.|.||||||||.||||||...||||
BPUM_1527___f     51 AAAATTAGATGTTGTAGCCAACAACGTAGCCAACGTCAATACACACGGAT    100

BSNT_02656___    101 TCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAGCCAAACGATTGCC    150
                     .||||||.||||||.|.||.||||||||||||||.||||||||.|||   
BPUM_1527___f    101 ACAAAAAAAGCCGTATCACTTTTAAAGATATGGTCAGCCAAACCATT---    147

BSNT_02656___    151 GGCGGTTCTGCTG---------------CTGGTGCAACAATCGGCGGAAC    185
                     ||..||||||.||               |||||   .|||||        
BPUM_1527___f    148 GGAAGTTCTGGTGGGCCAACGAACAACTCTGGT---TCAATC--------    186

BSNT_02656___    186 AAACTCTAAGCAAATCGGTTTAGGTTCATC---ATCTGGCACAATTGATA    232
                      |||||.||||||||.||||||||.|||||   ||||   .||||.||||
BPUM_1527___f    187 -AACTCAAAGCAAATTGGTTTAGGATCATCTTTATCT---TCAATCGATA    232

BSNT_02656___    233 CAATTCAT-TCAACAAGCGCGA----CACAAAGCACAGGAA-GAAC----    272
                      ||.|||| ||    ||||.||    |.||||..|||  || ||||    
BPUM_1527___f    233 -AAATCATGTC----AGCGGGATCTTCTCAAAATACA--AATGAACCTTA    275

BSNT_02656___    273 --ACTTGATTTAGCAATTGACGGCGACGGTTACTTCCGAATTGATACAGG    320
                       |||| .|.||.||||    ||.||.||.|..|||||.|||||   |.|
BPUM_1527___f    276 CGACTT-CTATATCAAT----GGAGATGGGTTTTTCCGTATTGA---AAG    317

BSNT_02656___    321 TGACGG-GACAG---CTTATACAAGAGCAGGGAACTTC------TATTTA    360
                     |.|.|| || ||   .||||||||||.||||.||.|||      .|||.|
BPUM_1527___f    318 TCAAGGAGA-AGTTCTTTATACAAGAACAGGAAATTTCGACACTGATTCA    366

BSNT_02656___    361 GATAATACCGGAACACTGGTTACAGGTGATGG-------CTACCATGTGT    403
                     ||      .||||...|.||.||...||||||       ||||      |
BPUM_1527___f    367 GA------GGGAAGCTTAGTCACCCCTGATGGAAATTATCTAC------T    404

BSNT_02656___    404 TAAATATGAATGGGGGAACA----ATTAAAATTCC-TACTGATGCTCAAA    448
                     |..| ||||||||    |||    ||.|..||||| .|| |.||.|..||
BPUM_1527___f    405 TGGA-ATGAATGG----ACAAAAGATAACGATTCCAGAC-GGTGTTTCAA    448

BSNT_02656___    449 GCTTTAGCATTGGTTCTGATGGAAAGGTGTCAATTGTTGATGCTGAGGGG    498
                     |..|.||..|||||.|.|||||||.|.|.||..|||||           |
BPUM_1527___f    449 GTGTAAGTGTTGGTCCAGATGGAACGATTTCGGTTGTT-----------G    487

BSNT_02656___    499 AAAACA------CAAGA--CGGGGGACAAATCGGGA----TTGTTACTTT    536
                     ||||||      |||||  ||..||.|||||    |    |.||..||||
BPUM_1527___f    488 AAAACAATGTATCAAGAACCGTTGGTCAAAT----ATCACTAGTATCTTT    533

BSNT_02656___    537 TGCC--AA--CAGTGATGGATTGGATAAAATCGGAAGA-AACCTATACCG    581
                       ||  ||  ||| || ||..|.||.|||.|.|| .|| |||||.||.||
BPUM_1527___f    534 --CCGTAACGCAG-GA-GGGCTAGACAAAGTTGG-TGACAACCTTTATCG    578

BSNT_02656___    582 TGAATCTTTAAACTCTGG----------AACGGCCAGTGCAGCGAACCAG    621
                     ..||.|.||||.|||.||          |||  |||    |.||.|||| 
BPUM_1527___f    579 CCAAACGTTAAGCTCAGGTGCTCCAAGTAAC--CCA----ATCGTACCA-    621

BSNT_02656___    622 CCTGGTGACGGCGGAACTGGTGCTCTT--AAATCAGGATTTCTCGAAATG    669
                        |||||....|||||.||.| ||.|  |||.|.||| ..||.||||||
BPUM_1527___f    622 ---GGTGAACAAGGAACGGGCG-TCATCCAAACCGGGA-AACTTGAAATG    666

BSNT_02656___    670 TCTAACGTCGATTTAACTGACGAATTTACTGAAATGATCGTAGCCCAGCG    719
                     ||.|||||.||||||||.|||||||||||.||||||||..|.||.|||||
BPUM_1527___f    667 TCAAACGTTGATTTAACAGACGAATTTACCGAAATGATTATCGCGCAGCG    716

BSNT_02656___    720 CGGATTCCAATCAAACTCAAAAATTATTACAACATCTGATGAAATCCTTC    769
                     .|||||||||||.||..||||.|..||.||||||||||||||||||||.|
BPUM_1527___f    717 TGGATTCCAATCGAATGCAAAGACGATCACAACATCTGATGAAATCCTGC    766

BSNT_02656___    770 AAGAACTGGTTAACCTTAAACGTTAA    795
                     ||||.||.||.||.||.|||||.||.
BPUM_1527___f    767 AAGAGCTTGTGAATCTGAAACGATAG    792


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02656 and BPUM_1527

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
