Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02649 and BPUM_1523

See Amino acid alignment / Visit BSNT_02649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence dna-align/BSNT_02649___fliJ.1.24716.seq
#    -bsequence dna-align/BPUM_1523___fliJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02649___fliJ-BPUM_1523___fliJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02649___fliJ-BPUM_1523___fliJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02649___fliJ
# 2: BPUM_1523___fliJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 461
# Identity:     336/461 (72.9%)
# Similarity:   336/461 (72.9%)
# Gaps:          22/461 ( 4.8%)
# Score: 1225.0
# 
#
#=======================================

BSNT_02649___      1 ------------GTGGCTTATCAATTTAGATTCCAAAAGCTGCTGGAACT     38
                                 |||...|||||.|..|.|||.||||||||..|.|||||
BPUM_1523___f      1 TTGACGAAAACAGTGAGATATCAGTACAAATTTCAAAAGCTCTTAGAACT     50

BSNT_02649___     39 AAAAGAAAATGAAAAAGACCAATCCTTATCCGAGTATCAGCAATCAGTTT     88
                     .|||||||.||||||||||.|.||..|..|.|.|||.||.|||||.||||
BPUM_1523___f     51 GAAAGAAAGTGAAAAAGACAAGTCACTCGCAGCGTACCAACAATCCGTTT    100

BSNT_02649___     89 CTGAATTTGAAAACGTTGCTGAAAAATTATATGAGAATATGAGCAAAAAG    138
                     |.|.||||||..|.||.||||||||..|.|||||.||||||||.|||||.
BPUM_1523___f    101 CGGCATTTGAGCAAGTCGCTGAAAAGCTCTATGAAAATATGAGTAAAAAA    150

BSNT_02649___    139 GAATTGCTGGAACAAAATAAGGAAAAGAAATTAAAAAGCGGCATGAGTGT    188
                     |||||..|||||.|||..||.|||.|.||..|.|.|||.||.||||||||
BPUM_1523___f    151 GAATTAATGGAAAAAAGCAAAGAAGAAAAGCTGAGAAGTGGTATGAGTGT    200

BSNT_02649___    189 ACAAGAAATGAGGCACTACCAACAATTTGTCTCAAATCTTGATAATACGA    238
                     .|||||||||.|.||.||.||.||||||||..|.|||.|.|||||.||.|
BPUM_1523___f    201 TCAAGAAATGCGTCATTATCAGCAATTTGTGACCAATTTAGATAACACCA    250

BSNT_02649___    239 TCTATCACTATCAAAAGCTTGTCATTATGAAAAGAAATCAAATGAATCAA    288
                     |..|.||.|||||..|||||||.||.|||||..|..|||||||||||.||
BPUM_1523___f    251 TTCAGCATTATCAGCAGCTTGTGATCATGAAGCGCCATCAAATGAATGAA    300

BSNT_02649___    289 AAACAA---GAAATTTTGACAGAGAAAAACATTGAAGTGAAAAAGTTTGA    335
                     ||||||   ||   |||.||.||.||||||||||||.|.|||||||||||
BPUM_1523___f    301 AAACAATCTGA---TTTAACTGAAAAAAACATTGAATTTAAAAAGTTTGA    347

BSNT_02649___    336 AAAAATGCGTGAAAAACAGTTTAAAATGTTTGCTCTTGAAGATAAAGCTG    385
                     |||||||...|||||.||.|.|.|||.||||.|.||||||.||||.||  
BPUM_1523___f    348 AAAAATGAAAGAAAAGCAATATGAAAAGTTTTCCCTTGAACATAAGGC--    395

BSNT_02649___    386 CA--GAAATGAAAGAAATGGACGATATTTCGATTAAGCAGTTTATGATTC    433
                     ||  |||||||||||||||||.|||||.||.||.|..||.||.|||.|||
BPUM_1523___f    396 CATTGAAATGAAAGAAATGGATGATATCTCTATCAGCCAATTCATGTTTC    445

BSNT_02649___    434 AAGGCCATTAG    444
                     ||||.||||||
BPUM_1523___f    446 AAGGACATTAG    456


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