Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02645 and BPUM_1520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02645___fliG.1.24716.seq
# -bsequence dna-align/BPUM_1520___fliG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02645___fliG-BPUM_1520___fliG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02645___fliG-BPUM_1520___fliG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02645___fliG
# 2: BPUM_1520___fliG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity: 770/1029 (74.8%)
# Similarity: 770/1029 (74.8%)
# Gaps: 24/1029 ( 2.3%)
# Score: 2822.0
#
#
#=======================================
BSNT_02645___ 1 ATGGCGAGACGTGATCAAGATAAGCTTACAGGAAAACAAAAAGCAGCCAT 50
|||.|||||...||||.|.||...||.|||||.|.||||||||||||.||
BPUM_1520___f 1 ATGTCGAGAAAAGATCCAAATCGACTAACAGGCAGACAAAAAGCAGCAAT 50
BSNT_02645___ 51 TCTCATGATTTCCTTGGGGTTAGATGTGTCAGCTTCTGTCTATAAGCACT 100
.||.|||||||||||.|||.||||.||||||||.|||||.||.||.||..
BPUM_1520___f 51 CCTAATGATTTCCTTAGGGCTAGACGTGTCAGCATCTGTATACAAACATC 100
BSNT_02645___ 101 TAACCGATGAAGAAATTGAAAGGCTTACTCTGGAAATATCAGGTGTTCGA 150
|..|.||.||.|||||.||||...|.||.||.|||||.||...|||.|||
BPUM_1520___f 101 TGTCTGAAGACGAAATAGAAAAATTAACACTTGAAATTTCCAATGTACGA 150
BSNT_02645___ 151 AGCGTCGAT-CATCAAAAAAAGGATGAAATCATAGAAGAATTTCATAATA 199
||.||.||| |..|.|||||| |||||||||||.|||||.|||||.|..|
BPUM_1520___f 151 AGTGTAGATACTGCTAAAAAA-GATGAAATCATCGAAGAGTTTCACAGCA 199
BSNT_02645___ 200 TAGCCATTGCGCAAGATTATATTTCTCAAGGCGGT-TTAAGCTATGCAAG 248
|.|||||.|||||.||.||.||.||.||||||||| |||.| ||.|||||
BPUM_1520___f 200 TCGCCATCGCGCAGGACTACATATCACAAGGCGGTCTTATG-TACGCAAG 248
BSNT_02645___ 249 ACAAGTTCTGGAAAAGGCGCTTGGAGAGGATAAGGCGGAGAACATTCTAA 298
||||||.||.|||||.||.|||||.|||||.||.|||||.|.|||..|||
BPUM_1520___f 249 ACAAGTACTTGAAAAAGCACTTGGTGAGGACAAAGCGGACAGCATCTTAA 298
BSNT_02645___ 299 ACAGGCTGACTTCTTCTTTGCAGGTTAAACCATTTGATTTTGCCAGAAAA 348
||.|..|.||.||.||..|.||.||.||.||.|||||||||||..||||.
BPUM_1520___f 299 ACCGATTAACATCCTCGCTTCAAGTGAAGCCGTTTGATTTTGCTCGAAAG 348
BSNT_02645___ 349 GCGGAGCCAGAACAAATTTTGAATTTTATCCAGCAAGAGCATCCGCAGAC 398
||.||.|||||||||||.||.||.|||||||||||.||||||||.||.||
BPUM_1520___f 349 GCTGACCCAGAACAAATCTTAAACTTTATCCAGCATGAGCATCCACAAAC 398
BSNT_02645___ 399 GATGGCGTTAATCTTGTCTTATTTAGATCCAGTGCAGGCCGGGCAAATTT 448
.||.|||.|.|||.|.||.||.|||||||||||.||.||.||.||.||.|
BPUM_1520___f 399 CATTGCGCTCATCCTTTCCTACTTAGATCCAGTCCAAGCAGGACAGATAT 448
BSNT_02645___ 449 TATC---------CGAGCTGAACCCTGAAGTGCAGGCTGAGGTTGCGAGA 489
|||| |||| ||.||.||..|.||||||||||||
BPUM_1520___f 449 TATCTGAATTAGGCGAG---------GATGTACAAACAGAGGTTGCGAGA 489
BSNT_02645___ 490 AGAATCGCGGTCATGGATAGAACGTCTCCAGAAATAATTAACGAGGTAGA 539
.|.||.||..|.|||||..|.||.||||||||.||.||.||.||.||.||
BPUM_1520___f 490 CGTATTGCTTTAATGGACCGCACATCTCCAGAGATCATCAATGAAGTGGA 539
BSNT_02645___ 540 ACGGATTCTGGAACAAAAATTATCTTCTGCATTTACTCAGGATTATACAC 589
|||.|||||.||.|||||..|.|||||..|.|||||.||.||.|||||.|
BPUM_1520___f 540 ACGCATTCTTGAGCAAAAGCTTTCTTCAACCTTTACGCAAGACTATACGC 589
BSNT_02645___ 590 AAACAGGCGGAATTGAAGCTGTTGTGGAAGTGTTAAACGGGGTAGACAGA 639
||||.||||||.|.|||||.|||||.|||||..||||.||.||||||.|.
BPUM_1520___f 590 AAACGGGCGGAGTCGAAGCGGTTGTAGAAGTACTAAATGGTGTAGACCGT 639
BSNT_02645___ 640 GGGACAGAGAAGACGATCTTGGATTCATTGGAAATTCAGGATCCCGATCT 689
|.|||.||||||||.||.||.||..|..|.||||||||.|||||.||.||
BPUM_1520___f 640 GCGACCGAGAAGACCATTTTAGACACTCTTGAAATTCAAGATCCTGAGCT 689
BSNT_02645___ 690 TGCTGAAGAGATTAAAAAGCGGATGTTTGTCTTCGAAGATATTGTCACAC 739
||||||.||.|||||.||.||.|||||||||||.||||||||||||||.|
BPUM_1520___f 690 TGCTGATGAAATTAAGAAACGTATGTTTGTCTTTGAAGATATTGTCACTC 739
BSNT_02645___ 740 TTGATAACCGTGCAATTCAGAGAGTCATTCGCGATGTTGAGAACGACGAT 789
||||.|.|.|.||.||||||.|.||.||..|.||.|||||.||.||.||.
BPUM_1520___f 740 TTGACAGCAGAGCGATTCAGCGCGTGATCAGAGACGTTGAAAATGATGAC 789
BSNT_02645___ 790 TTGCTCCTTTCATTAAAGGTTGCAAGCGAGGAAGTCAAAGAAATTGTGTT 839
||..|.||..||.|.||.||.||||||||.||.||||||||||||||.||
BPUM_1520___f 790 TTATTGCTCGCACTCAAAGTGGCAAGCGAAGAGGTCAAAGAAATTGTCTT 839
BSNT_02645___ 840 CAACAATATGTCACAGCGTATGGTTGAAACCTTCAAAGAAGAAATGGAAT 889
|..|||.|||||||||.|.|||||.|||||.|||||||||||||||||.|
BPUM_1520___f 840 CCGCAACATGTCACAGAGAATGGTCGAAACGTTCAAAGAAGAAATGGAGT 889
BSNT_02645___ 890 TTATGGGCCCTGTAC-GCTTGAAAGATGTAGAAGAAGCACAATCGAGAAT 938
|||||||.|||||.| |||| |.||||||.||.|||||||||.|..|.||
BPUM_1520___f 890 TTATGGGACCTGTCCGGCTT-AGAGATGTCGAGGAAGCACAAACCCGTAT 938
BSNT_02645___ 939 TGTAAGCATCGTCAGAAAGCTTGAAGAAGCCGGTGAAATTGTGATAGCAA 988
|||.||||||||.|||...||.||.|||||.||.||||||||.|||||..
BPUM_1520___f 939 TGTCAGCATCGTAAGACGACTCGAGGAAGCTGGAGAAATTGTCATAGCTC 988
BSNT_02645___ 989 GAGGCGGAGGGGATGATATTATTGTCTAA 1017
||||||||||.||.|||||.||||||||.
BPUM_1520___f 989 GAGGCGGAGGAGACGATATCATTGTCTAG 1017
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