Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02640 and BPUM_1516
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02640___flgB.1.24716.seq
# -bsequence dna-align/BPUM_1516___flgB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02640___flgB-BPUM_1516___flgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02640___flgB-BPUM_1516___flgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02640___flgB
# 2: BPUM_1516___flgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 295/407 (72.5%)
# Similarity: 295/407 (72.5%)
# Gaps: 34/407 ( 8.4%)
# Score: 1079.5
#
#
#=======================================
BSNT_02640___ 1 TTGAGCT-TATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGTA 49
||| |.| |||||||||||||||||...||.|||||.|||||||||.|.|
BPUM_1516___f 1 TTG-GATATATTTTCTGGAACGATAAGCAACCTTGAGAATGCCTTGGGCA 49
BSNT_02640___ 50 GAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGAT 99
|||||.||.||||||||||||||||||..|||||||||||.||||||||.
BPUM_1516___f 50 GAGCGAATGTTAAGCAAAAAGTCATAAGCAATAATATCGCGAATATAGAC 99
BSNT_02640___ 100 ACACCGAACTATAAGGCAAAAAAAGTCTCTTTCCAAAATTTATTA----- 144
|||||||||||.|||.|.|||||.|||.|.||.||..||.|..||
BPUM_1516___f 100 ACACCGAACTACAAGTCGAAAAACGTCGCATTTCATGATATGCTAAACGA 149
BSNT_02640___ 145 ------GATCAAGAATCTTCGCGTCTT-GAAGCGATAAAAACAGACTATC 187
||||||| || ||.||.|.|||||||.||.|..
BPUM_1516___f 150 TGCGTCGATCAAG------------TTAGATGCTAAAAAAACATACCAAG 187
BSNT_02640___ 188 GTCATGTTGATTTTTCTGATGCTGATTCGAATTATTCAATTGTTGCGAGC 237
||||..|||||||||||.|..|.|..||.|||||||||.|||||.|||||
BPUM_1516___f 188 GTCACATTGATTTTTCTAAAACAGGGTCTAATTATTCAGTTGTTTCGAGC 237
BSNT_02640___ 238 GGAGA----TACATCGTATCAGCAAAACGGAAACAATGTTGATGTTGACA 283
| |||.||.|||||..||||||||||.|||||.|||.||||..
BPUM_1516___f 238 ----AACCGTACTTCATATCAAGAAAACGGAAATAATGTCGATATTGATC 283
BSNT_02640___ 284 AAGAGATGACAGAATTGGCGCAAAATCAAATCAACTATCAAGCTTTGGTT 333
|||||||||..|||.|.||..||||.|||||..|.|||.|.||.||||||
BPUM_1516___f 284 AAGAGATGAGTGAACTCGCTAAAAACCAAATTCAGTATAATGCGTTGGTT 333
BSNT_02640___ 334 GAAAGAATGAACGGTAAATTTAATTCGCTGAAGACCGTATTAACAGGAGG 383
||||||||||..||.|||||.|||||.||.||.||.||.||.||||||||
BPUM_1516___f 334 GAAAGAATGAGTGGAAAATTCAATTCTCTTAAAACAGTTTTGACAGGAGG 383
BSNT_02640___ 384 AAAATGA 390
.||.|||
BPUM_1516___f 384 TAAGTGA 390
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