Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02636 and BPUM_1514
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_02636___hslU.1.24716.seq
# -bsequence dna-align/BPUM_1514___hslU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02636___hslU-BPUM_1514___hslU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02636___hslU-BPUM_1514___hslU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02636___hslU
# 2: BPUM_1514___hslU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1431
# Identity: 1080/1431 (75.5%)
# Similarity: 1080/1431 (75.5%)
# Gaps: 57/1431 ( 4.0%)
# Score: 4015.0
#
#
#=======================================
BSNT_02636___ 1 ATGGAAAAAAAACCGTTAACTCCTAGACAGATTGTAGATCGGTTAGACCA 50
|||||.|||||.|||||.||.||.|||.||||.||.||...|.|.||.||
BPUM_1514___h 1 ATGGAGAAAAAGCCGTTCACCCCAAGAGAGATAGTTGAAAAGCTTGATCA 50
BSNT_02636___ 51 ATATATTGTCGGTCAGCAAAATGCGAAAAAAGCTGTCGCCGTGGCATTAA 100
|||.|||.|.|||||||...|||||||||||||.||.||.|||||.||||
BPUM_1514___h 51 ATACATTATTGGTCAGCTTGATGCGAAAAAAGCAGTGGCGGTGGCTTTAA 100
BSNT_02636___ 101 GAAACCGCTATAGAAGAAGTCTTCTGGATGAAAAGCTGAAGGACGAGGTC 150
|||||||.||.||||||||.|||.|..||||.|||||.|||||.||.|||
BPUM_1514___h 101 GAAACCGTTACAGAAGAAGCCTTTTACATGATAAGCTAAAGGATGAAGTC 150
BSNT_02636___ 151 GTTCCGAAAAACATTTTAATGATGGGTCCTACCGGCGTCGGGAAAACTGA 200
|||||||||||||||||||||||.||.||.||.||.||.||.|||||.||
BPUM_1514___h 151 GTTCCGAAAAACATTTTAATGATCGGCCCAACAGGTGTGGGAAAAACAGA 200
BSNT_02636___ 201 AATTGCCAGACGAATCGCTAAGCTTTCAGGTGCGCCATTTATCAAAATTG 250
.||||||.|..||||.||.||..||||.||||||||.||.||.|||.|.|
BPUM_1514___h 201 GATTGCCCGCAGAATTGCAAAAATTTCTGGTGCGCCTTTCATTAAAGTGG 250
BSNT_02636___ 251 AAGCTACTAAATTTACCGAAGTCGGCTATGTAGGCAGAGATGTTGAATCA 300
||||.||.||.|||||.|||||.||.||.||.|||.|.|||||.||||||
BPUM_1514___h 251 AAGCGACGAAGTTTACTGAAGTTGGTTACGTTGGCCGTGATGTAGAATCA 300
BSNT_02636___ 301 ATGGTCAGAGATCTTGTGGAGACTTCTGTTC-GTCTTATCAAAGAAGAGA 349
||||||||||||||.||.|||||..| |.|| |..||.||||||||||.|
BPUM_1514___h 301 ATGGTCAGAGATCTAGTTGAGACAGC-GATCAGAATTGTCAAAGAAGACA 349
BSNT_02636___ 350 AAATGAATGAAGTAAAGGAACAGGCAGAAGAAAATGCAAACAAACGCATT 399
|.|||||.||.||..|.|||.|.||||||.||.|.|||||.|||||..||
BPUM_1514___h 350 AGATGAAAGATGTGCAAGAAGAAGCAGAAAAACAAGCAAATAAACGTCTT 399
BSNT_02636___ 400 GTTCGTCTGTTAGTTCCTGGGAAGAAAAAA---CAATCTGGCGTTAAAAA 446
||||.|.|..|.||||||||.||||||||| ||.||| ||.|||||
BPUM_1514___h 400 GTTCATTTACTTGTTCCTGGCAAGAAAAAAAGCCAGTCT---GTGAAAAA 446
BSNT_02636___ 447 TCCGTTTGAAATGTTTTTTGGAGGCAGCCAGCCGAATGGTGAAGATGAGG 496
|||.|||||.|||.|.|||||.|| |.| ||.|||||||||
BPUM_1514___h 447 TCCTTTTGAGATGCTGTTTGGTGG-----ATC----TGATGAAGATGA-- 485
BSNT_02636___ 497 CGGAGAGCCAG-----------GAAGAAGCAAACATCGAA---GAA---A 529
|.|.||.|.|| ||||||| |.||| ||| |
BPUM_1514___h 486 CCGTGATCGAGATCAATCAAGTGAAGAAG------TTGAACTTGAATCGA 529
BSNT_02636___ 530 AAAGAAAACGAATGGCGCATCAGCTGGCTTTAGGAGAGCTCGAAGACTAC 579
.||||||||||||.||.|||||.||.||..|.||.||.||.|||||..|.
BPUM_1514___h 530 CAAGAAAACGAATCGCTCATCAACTTGCCATGGGCGAACTTGAAGATCAT 579
BSNT_02636___ 580 TATGTAACAGTAGAAGTCGAAGAGCAGCAGCCTTCTATGTTTGACATGCT 629
|||||.|||.|.||||||||||||||||||||.||.||||||||.|||||
BPUM_1514___h 580 TATGTCACAATTGAAGTCGAAGAGCAGCAGCCATCCATGTTTGATATGCT 629
BSNT_02636___ 630 GCAGGGCTCGGGTATGGAGCAGATGGGTATGAACATGCAGGATGCGCTGA 679
.||||||||||||||||||||.|||||.||||||||||||||||||||
BPUM_1514___h 630 TCAGGGCTCGGGTATGGAGCAAATGGGCATGAACATGCAGGATGCGCT-- 677
BSNT_02636___ 680 GCGG--AT-TAATGCCAAAGAAAAAGAAACGGCGCAAAATGACAGTCAGA 726
||| || |.|||||.||.||.||.|||||..|.||..||||.||.|||
BPUM_1514___h 678 -CGGCAATCTCATGCCTAAAAAGAAAAAACGCAGAAAGCTGACCGTTAGA 726
BSNT_02636___ 727 GAAGCCAGAAAAGTCCTGACGAATGAAGAAGCAAGCAAACTCATCGATAT 776
|||||.|||||.|...|.||...|||.|||||...||||||.||.||.||
BPUM_1514___h 727 GAAGCGAGAAAGGCGTTAACAGCTGAGGAAGCTTCCAAACTGATTGACAT 776
BSNT_02636___ 777 GGATGAAGTCAGCCAGGAAGCTGTTCAGAGAGCAGAAGAGAGCGGGATTA 826
|||||||||.||.||.||||||||..|.|.||||||..||...|||||||
BPUM_1514___h 777 GGATGAAGTTAGTCAAGAAGCTGTCTATAAAGCAGAGCAGCAAGGGATTA 826
BSNT_02636___ 827 TCTTTATCGATGAGATTGATAAAATCGCAAAGAACGGCGGTGCATCTTCT 876
|.||||||||.||.||.||.||||||||.||.|.|||.|||||| ||.
BPUM_1514___h 827 TTTTTATCGACGAAATCGACAAAATCGCCAAAAGCGGTGGTGCA---TCA 873
BSNT_02636___ 877 TCTGCCGATGTTTCAAGAGAAGGCGTTCAGCGGGATATTCTGCCGATTGT 926
|||||.||||||||..|.|||||.|||||.||.||||||.|.||||||||
BPUM_1514___h 874 TCTGCAGATGTTTCTCGTGAAGGGGTTCAACGTGATATTTTACCGATTGT 923
BSNT_02636___ 927 TGAGGGCTCAACCGTTGTCACAAAATATGGTTCTGTAAAAACAGACCATG 976
.||.||.|||||.||..|.||.||||||||..|.||.|||||||||||||
BPUM_1514___h 924 AGAAGGTTCAACTGTGATGACGAAATATGGGGCAGTGAAAACAGACCATG 973
BSNT_02636___ 977 TATTATTTATTGCAGCAGGAGCGTTTCATATGGCCAAACCGTCTGATTTG 1026
|..|.|||.|.||||||||.||.|||||||||||.|||||.||.||||||
BPUM_1514___h 974 TGCTTTTTGTAGCAGCAGGGGCATTTCATATGGCAAAACCATCAGATTTG 1023
BSNT_02636___ 1027 ATTCCTGAGCTGCAGGGGCGTTTCCCGATTCGTGTAGAACTGAACAAACT 1076
|||||.|||||.||.||.||.|||||.||||||||||||.|..|.|||.|
BPUM_1514___h 1024 ATTCCAGAGCTTCAAGGACGCTTCCCAATTCGTGTAGAATTAGATAAATT 1073
BSNT_02636___ 1077 CACGGTA--GACGACTTCGTGAGAATTTTGGTTGAGCCGGATAATGCGCT 1124
.| ||| ||.|||||.||||.|||.||....||.||.||||||||..|
BPUM_1514___h 1074 AA--GTATCGAAGACTTTGTGAAAATCTTAACGGAACCAGATAATGCATT 1121
BSNT_02636___ 1125 GCTGAAACAATATCAGGCATTA-TTGCAGACAGAAGGTATATCTCTTGAA 1173
..|.||.||||||.|.||.||| ||| |.||.||||||||||||||||||
BPUM_1514___h 1122 ATTAAAGCAATATAAAGCTTTACTTG-AAACGGAAGGTATATCTCTTGAA 1170
BSNT_02636___ 1174 TTTTCTGACGAAGCTATTCATAAGATTGCTGAAGTTGCTTATCATGTGAA 1223
|||||||||||.|||||||||||||||||.|||||.|||||||||||.||
BPUM_1514___h 1171 TTTTCTGACGATGCTATTCATAAGATTGCCGAAGTGGCTTATCATGTCAA 1220
BSNT_02636___ 1224 CCAGGACACAGATAATATCGGTGCGAGACGCCTTCATACAATACTTGAAC 1273
.|||||.||||||||.||||||||.|||.|.||||||||.|||||||||.
BPUM_1514___h 1221 TCAGGAGACAGATAACATCGGTGCAAGAAGGCTTCATACCATACTTGAAA 1270
BSNT_02636___ 1274 GCCTATTAGAAGATTTGTCGTTTGAAGCTCCAGATGTAACGATGGAGAAA 1323
..||..|.|||||..|.||.|||||.||.||.|||.|.||..|.|.||.|
BPUM_1514___h 1271 AGCTGCTTGAAGAGCTTTCATTTGAGGCGCCTGATATTACACTAGGGACA 1320
BSNT_02636___ 1324 ATAACGATTACACCACAGTATGTCGAAGAAAAGCTCGGAACGATAGCCAA 1373
.|.||.|||||.||.||||||||.|||||.|||||.||||.|||.||.||
BPUM_1514___h 1321 GTGACCATTACCCCTCAGTATGTAGAAGAGAAGCTAGGAAAGATTGCAAA 1370
BSNT_02636___ 1374 AAACAAAGATTTAAGTCAATTTATATTGTGA 1404
.||||||||.|||||||||||||||.|.|.|
BPUM_1514___h 1371 TAACAAAGACTTAAGTCAATTTATACTTTAA 1401
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