Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02628 and BPUM_1507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence dna-align/BSNT_02628___sucC.1.24716.seq
# -bsequence dna-align/BPUM_1507___sucC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02628___sucC-BPUM_1507___sucC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02628___sucC-BPUM_1507___sucC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02628___sucC
# 2: BPUM_1507___sucC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1169
# Identity: 934/1169 (79.9%)
# Similarity: 934/1169 (79.9%)
# Gaps: 19/1169 ( 1.6%)
# Score: 3722.5
#
#
#=======================================
BSNT_02628___ 1 ATGAATATCCATGAGTACCAGGGAAAAGAAGTCCTCAGAAAATATGGGGT 50
||||||||||||||||||||.|||||||||.||||.||||||||||||||
BPUM_1507___s 1 ATGAATATCCATGAGTACCAAGGAAAAGAAATCCTAAGAAAATATGGGGT 50
BSNT_02628___ 51 ATCTGTTCCTGAAGGTAAAGTGGCTTTTACAGCAGAAGAAGCAGTTGAGA 100
.||.|||||..|.||||||||.||.||||||.|.||.|||||||| ||
BPUM_1507___s 51 TTCAGTTCCAAATGGTAAAGTAGCATTTACACCTGATGAAGCAGT---GA 97
BSNT_02628___ 101 GTGCA----AAGAGCTTATCCAGCTCGGTTTATGTCGTAAAGGCTCAAAT 146
..||| |||||| ||...|||||.||.|||||||||||.||.||.||
BPUM_1507___s 98 AAGCATCAGAAGAGC-TAGAAAGCTCTGTATATGTCGTAAAAGCACAGAT 146
BSNT_02628___ 147 TCATGCTGGCGGTCGAGGCAAAGCTGGTGGGGTAAAAATAGCAAAATCAT 196
||||||.|||||.||.||||||||.||.|||||||||||.||||||.||.
BPUM_1507___s 147 TCATGCAGGCGGCCGTGGCAAAGCAGGCGGGGTAAAAATTGCAAAAACAA 196
BSNT_02628___ 197 TAGACGAAGTAAAAGCGTATGCCGAAGAACTATTAGGGAAGACCCTAGTT 246
.|||.|||||.||||.||.|||.||.|||.|..|.||.||.||.||.||.
BPUM_1507___s 197 AAGATGAAGTGAAAGGGTTTGCAGAGGAATTGCTCGGCAAAACACTTGTC 246
BSNT_02628___ 247 ACACATCAGACGGGTCCGGACGGCCAAGTAATAAAACGCTTACTTATTGA 296
||||||||.||.|||||.||.||.|..|.|||||||||||||||||||||
BPUM_1507___s 247 ACACATCAAACTGGTCCTGAGGGACGCGAAATAAAACGCTTACTTATTGA 296
BSNT_02628___ 297 AGAAGGCTGCGATATTAAAAAAGAATATTACATCGGTCTAGTGCTTGACC 346
|||||||||||||||..||||.||.||.|||.|.||.||.||..|.|||.
BPUM_1507___s 297 AGAAGGCTGCGATATCCAAAAGGAGTACTACGTAGGACTTGTTTTGGACA 346
BSNT_02628___ 347 GCGCCACTTCAAGAATCGTTTTGATGGCTTCTGAAGAAGGCGGAACGGAA 396
|.||.||.||||||||.||.|||||||||||||||||||||||.||.|||
BPUM_1507___s 347 GAGCGACATCAAGAATTGTATTGATGGCTTCTGAAGAAGGCGGTACTGAA 396
BSNT_02628___ 397 ATTGAAGAAGTTGCGGAGAAAACACCGGAAAAAATCAAAAAAGCTGTCAT 446
|||||||||||.||.||.|||||.||.|||||||||...||||..|||||
BPUM_1507___s 397 ATTGAAGAAGTAGCAGAAAAAACGCCAGAAAAAATCGTCAAAGTGGTCAT 446
BSNT_02628___ 447 TGATCCAGCTGTTGGCCTTCAAGGCTATCAAGCCAGAGAAATTGCATTCG 496
.||.|||||..||||..|.|||||||||||.||.||||||.|.||.||..
BPUM_1507___s 447 CGACCCAGCGATTGGATTGCAAGGCTATCAGGCGAGAGAAGTAGCGTTTA 496
BSNT_02628___ 497 CTATTAATATTCCAAAAGAGCTCGTGGGAAAAGCTGCTAAATTTATGCTT 546
..|||||||||||||.|.|..|.||.||..||||||.|||.||||||...
BPUM_1507___s 497 AAATTAATATTCCAACAAAATTAGTTGGCCAAGCTGTTAAGTTTATGACA 546
BSNT_02628___ 547 GGACTATATAAAGCGTTTGTTGAGAAAGACTGCTCAATCGCCGAAATCAA 596
.|.||.||.||.|||||..||||.|||||.||.|||||.||.||.||.||
BPUM_1507___s 547 AGTCTTTACAATGCGTTCATTGAAAAAGATTGTTCAATTGCTGAGATTAA 596
BSNT_02628___ 597 TCCGCTTGTTGTTACCGGCGACGGAAATGTGATGGCGCTTGATGCAAAAT 646
|||.||||||||.||.|||||.|||||.||.|||||.||||||||.||||
BPUM_1507___s 597 TCCACTTGTTGTAACAGGCGATGGAAAAGTCATGGCACTTGATGCGAAAT 646
BSNT_02628___ 647 TGAATTTTGACAGCAATGCGTTGTACCGACAAAAGGACATTATGGAATAC 696
|.||.|||||.||||||||.||.||..|||||||.||.||..|.||||||
BPUM_1507___s 647 TAAACTTTGATAGCAATGCCTTATATAGACAAAAAGATATATTAGAATAC 696
BSNT_02628___ 697 AGAGATTTGGATGAAGAAGATCCGAAAGAAATTGAAGCGTCCAAATATGA 746
.|.||..|.||||||||.|||||.||||||||||||||.||.||||||||
BPUM_1507___s 697 CGTGACCTTGATGAAGAGGATCCAAAAGAAATTGAAGCATCTAAATATGA 746
BSNT_02628___ 747 TCTAAGCTACATTTCCCTTGATGGAAATATCGGCTGTATGGTAAACGGCG 796
|||.|||||||||||.||.|||||||||||||||||||||||.||.||.|
BPUM_1507___s 747 TCTGAGCTACATTTCTCTAGATGGAAATATCGGCTGTATGGTCAATGGTG 796
BSNT_02628___ 797 CGGGGCTTGCAATGTCCACGATGGATATTATCAAGCATTATGGAGGAGAA 846
|.||.|||||.|||||.||.||||||||.|||||||||||.||.||.||.
BPUM_1507___s 797 CAGGTCTTGCGATGTCTACAATGGATATCATCAAGCATTACGGCGGGGAC 846
BSNT_02628___ 847 CCGGCCAACTTCCTTGATGTGGGCGGCGGTGCAACCGCTGAAAAAGTCAC 896
||.||.||||||||.|||||.||||||||||||||.|||||||||||.||
BPUM_1507___s 847 CCTGCAAACTTCCTGGATGTTGGCGGCGGTGCAACAGCTGAAAAAGTAAC 896
BSNT_02628___ 897 GGAAGCATTTAAAATCATTCTT-TCTGATCAAAACGTTAAAGGGATTTTT 945
||||||||||||||||| |||| |||||||||||.||.|||||||||||.
BPUM_1507___s 897 GGAAGCATTTAAAATCA-TCTTATCTGATCAAAATGTAAAAGGGATTTTC 945
BSNT_02628___ 946 GTCAACATTTTCGGCGGCATTATGAAATGTGATGTCATCGCAGAAGGGGT 995
||.||||||||.||||||||.|||||||||||||||||.||||||||.||
BPUM_1507___s 946 GTGAACATTTTTGGCGGCATCATGAAATGTGATGTCATTGCAGAAGGTGT 995
BSNT_02628___ 996 TGTTGAAGCGACTAGACAAGTTGGTTTGACATTGCCGCTTGTCGTCCGTC 1045
.|||||||||||.|.||||||.||.||.|||||.||.||.||.||.||||
BPUM_1507___s 996 CGTTGAAGCGACGAAACAAGTCGGCTTAACATTACCACTCGTTGTACGTC 1045
BSNT_02628___ 1046 TTGAAGGCACAAACGTGGATCTAGGGAAGAAAATCCTTAGTGAATCAGGA 1095
|||||||.||||||||.||..||||||||||||||||.||.||.|||||.
BPUM_1507___s 1046 TTGAAGGAACAAACGTTGAATTAGGGAAGAAAATCCTGAGCGATTCAGGC 1095
BSNT_02628___ 1096 TTAAACATTACATCTGCGGAATCAATGGCTGACGGCGCGCAGAAA--ATC 1143
|||||.||.||.|||||.||.||.|||||||||| |.||||||| ||.
BPUM_1507___s 1096 TTAAATATCACTTCTGCTGAGTCTATGGCTGACG--GGGCAGAAAAGATT 1143
BSNT_02628___ 1144 GTATCCTTAGTTTAA---- 1158
|||||.|||| |.||
BPUM_1507___s 1144 GTATCTTTAG-TCAAGTAG 1161
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