Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02627 and BPUM_1506

See Amino acid alignment / Visit BSNT_02627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_02627___ylqH.1.24716.seq
#    -bsequence dna-align/BPUM_1506___ylqH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02627___ylqH-BPUM_1506___ylqH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02627___ylqH-BPUM_1506___ylqH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02627___ylqH
# 2: BPUM_1506___ylqH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     202/283 (71.4%)
# Similarity:   202/283 (71.4%)
# Gaps:           8/283 ( 2.8%)
# Score: 685.5
# 
#
#=======================================

BSNT_02627___      1 ATGAAAGA-GCAGACACCGATCAGAAAAGCTGTTGCTCTCCATTATGACG     49
                     |||||.|| .|| |.||||.|.||||..||.||.|||||.||||||||.|
BPUM_1506___y      1 ATGAAGGATTCA-AAACCGCTTAGAAGGGCGGTCGCTCTACATTATGATG     49

BSNT_02627___     50 AACAAAAAGACAAGGCGCCGAGAGTGATTGCCACAGGGAAGGGCCATGTA     99
                     ||.|||||.|.||||||||.|.|||..|.||.|||||||..|||.||||.
BPUM_1506___y     50 AAGAAAAACAAAAGGCGCCAAAAGTCGTCGCAACAGGGAGCGGCTATGTG     99

BSNT_02627___    100 GCTGACAACATTATCAAAGAAGCGAAAAAAGCAGGGGTCCCGATTCAAGA    149
                     ||.|||||.|||||..|||||||.|||||..|.||.||.||.||.|||||
BPUM_1506___y    100 GCAGACAATATTATTGAAGAAGCCAAAAAGTCGGGAGTTCCTATCCAAGA    149

BSNT_02627___    150 AGATCGGACCCTTGTCGAATTAATGCGCCATTTGACGGTAGATGATCAAA    199
                     |||.||.|...|.||||||.|.||||||||.||.||..|.|||||..|.|
BPUM_1506___y    150 AGACCGTAATTTAGTCGAACTCATGCGCCACTTAACACTGGATGAGGAGA    199

BSNT_02627___    200 TCCCTGAAGCTCTTTATGAAACGGTAGCCGAGATTTTTTCATTCATTTAC    249
                     ||||||||||..|.||.||.||.|||||.||.||.|||||.||.||.||.
BPUM_1506___y    200 TCCCTGAAGCGTTATACGATACTGTAGCAGAAATATTTTCGTTTATCTAT    249

BSNT_02627___    250 AAATTGGACGAAAGCGTAAAAAACAAAAAATAG    282
                     |..||.||..|      |||||..||||||||.
BPUM_1506___y    250 AGGTTAGATCA------AAAAATGAAAAAATAA    276


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