Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02615 and BPUM_1497

See Amino acid alignment / Visit BSNT_02615 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence dna-align/BSNT_02615___rpsP.1.24716.seq
#    -bsequence dna-align/BPUM_1497___rpsP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02615___rpsP-BPUM_1497___rpsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02615___rpsP-BPUM_1497___rpsP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02615___rpsP
# 2: BPUM_1497___rpsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     236/273 (86.4%)
# Similarity:   236/273 (86.4%)
# Gaps:           0/273 ( 0.0%)
# Score: 1032.0
# 
#
#=======================================

BSNT_02615___      1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGAGCAAAAAAATCTCCTTT     50
                     |||||||||||||||||||||||||||||||||.||||||.|||||||||
BPUM_1497___r      1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGATCAAAAAGATCTCCTTT     50

BSNT_02615___     51 CTATCGTATTGTTGTAGCAGATTCTCGTTCACCACGTGACGGCCGTTTCA    100
                     ||||||||||||.|||||||||||||||||||||||||||||.|||||||
BPUM_1497___r     51 CTATCGTATTGTAGTAGCAGATTCTCGTTCACCACGTGACGGTCGTTTCA    100

BSNT_02615___    101 TCGAAACAGTCGGAACTTACAACCCGGTTGCAAAACCAGCGGAAGTAAAA    150
                     ||||||||||.|||||.|||||.||.||...|..||||||.||.||.|||
BPUM_1497___r    101 TCGAAACAGTTGGAACATACAATCCAGTGTTATCACCAGCTGAGGTGAAA    150

BSNT_02615___    151 ATTGACGAAGAGCTTGCTCTTAAATGGCTTCAAACTGGAGCGAAACCATC    200
                     ||..|||||||..|.|||||||||||||||||||.|||.|||||||||||
BPUM_1497___r    151 ATCAACGAAGAATTAGCTCTTAAATGGCTTCAAAATGGTGCGAAACCATC    200

BSNT_02615___    201 TGATACAGTTCGCAACTTGTTCTCTAGCCAAGGAATCATGGAAAAATTCC    250
                     ||||||||||||||||.|.|||||.|||||||||||..|.||||||||.|
BPUM_1497___r    201 TGATACAGTTCGCAACCTTTTCTCAAGCCAAGGAATTCTTGAAAAATTTC    250

BSNT_02615___    251 ACAACGCTAAACAAGGCAAGTAA    273
                     |.||.||.|||.|..||||.|||
BPUM_1497___r    251 ATAATGCGAAAAACAGCAAATAA    273


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