Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02614 and BPUM_1496
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_02614___ffh.1.24716.seq
# -bsequence dna-align/BPUM_1496___ffh.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02614___ffh-BPUM_1496___ffh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02614___ffh-BPUM_1496___ffh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02614___ffh
# 2: BPUM_1496___ffh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1348
# Identity: 1101/1348 (81.7%)
# Similarity: 1101/1348 (81.7%)
# Gaps: 14/1348 ( 1.0%)
# Score: 4528.0
#
#
#=======================================
BSNT_02614___ 1 ATGGCATTTGAAGGATTAGCCGACCGACTGCAGCAGACGATTTCTAAAAT 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
BPUM_1496___f 1 ATGGCATTTGAAGGATTAGCCGACCGACTGCAGCAGACGATTTCAAAAAT 50
BSNT_02614___ 51 CCGCGGAAAAGGGAAA--GTCAGCGAACAAGATGTAAAAGATATGATGCG 98
||||||.|||||.||| |||| |||||||||||||||||.||||||||
BPUM_1496___f 51 CCGCGGCAAAGGAAAAGTGTCA--GAACAAGATGTAAAAGAAATGATGCG 98
BSNT_02614___ 99 TGAGGTTCGCCTTGCGCTGCTTGAGGCTGACGTTAACTTTAAAGTAGTCA 148
.||||||||||||||.||.|||||.||||||||.||.|||||||||||||
BPUM_1496___f 99 CGAGGTTCGCCTTGCCCTTCTTGAAGCTGACGTCAATTTTAAAGTAGTCA 148
BSNT_02614___ 149 AAGATTTTGTCAAAAAAGTAAGTGAACGCGCTGTAGGCCAAGACGTCATG 198
||||.|||||.||||||||||||||.||.||.||.||.|||||.||||||
BPUM_1496___f 149 AAGACTTTGTGAAAAAAGTAAGTGAGCGGGCAGTTGGACAAGAGGTCATG 198
BSNT_02614___ 199 AAAAGTCTGACGCCCGGCCAGCAGGTCATTAAAGTTGTTCAAGAGGAACT 248
|||||.||.||.||.||.||.|||||||||||||||||..||||.||.||
BPUM_1496___f 199 AAAAGCCTTACCCCTGGACAACAGGTCATTAAAGTTGTAAAAGAAGAGCT 248
BSNT_02614___ 249 GACTGAGCTGATGGGCGGCGAAGAGAGCAAAATCGCCGTCGCAAAAAGGC 298
.|||.|..|.||||||||.||||||||.||||||||.||.||.||||...
BPUM_1496___f 249 CACTCAATTAATGGGCGGAGAAGAGAGTAAAATCGCTGTAGCGAAAAAAT 298
BSNT_02614___ 299 CGCCGACTGTTATTATGATGGTCGGTCTCCAAGGTGCCGGTAAAACGACA 348
|.|||||.||.|||||||||||.|||||.|||||.||.||||||||.||.
BPUM_1496___f 299 CTCCGACGGTCATTATGATGGTTGGTCTTCAAGGGGCAGGTAAAACCACC 348
BSNT_02614___ 349 ACAAGCGGTAAGCTTGCGAATCTGCTGCGCAAAAAGCATAATCGCAAACC 398
||||..||.||||||||.|||.|.||.||||||||.||||||||.|||||
BPUM_1496___f 349 ACAACTGGGAAGCTTGCTAATTTACTTCGCAAAAAACATAATCGTAAACC 398
BSNT_02614___ 399 GATGCTGGTTGCTGCCGATATTTACCGCCCAGCCGCAATTAAGCAGCTGG 448
||||.||||.|||||.|||||||||.|.|||||.||.||..|||||||..
BPUM_1496___f 399 GATGATGGTGGCTGCAGATATTTACAGACCAGCAGCGATCCAGCAGCTTC 448
BSNT_02614___ 449 AAACACTCGGCAAACAGCTTGATATGCCTGTTTTCTCTCTTGGCGATCAG 498
||||.||.||.||||||||||||||||||||.||.||..|.||.|||||.
BPUM_1496___f 449 AAACGCTAGGGAAACAGCTTGATATGCCTGTGTTTTCATTAGGTGATCAA 498
BSNT_02614___ 499 GTCAGTCCTGTAGAAATAGCTAAACAGGCTATTGAGAAAGCCAAGGAAGA 548
|||||||||||.||.||.||.||||||||.||.||.|||||.||.|||||
BPUM_1496___f 499 GTCAGTCCTGTCGAGATTGCCAAACAGGCAATCGAAAAAGCGAAAGAAGA 548
BSNT_02614___ 549 ACATTATGACTACGTCATTTTGGATACGGCAGGGCGCTTGCATATCGACC 598
.||..||||.||.||||||||.|||||.|||||.|||.|.|||||.||..
BPUM_1496___f 549 GCACCATGATTATGTCATTTTAGATACAGCAGGACGCCTTCATATTGATG 598
BSNT_02614___ 599 ATGAACTGATGGATGAACTGACCAACGTCAAAGAAATCGCGAATCCGGAA 648
|.|||.|||||||||||||....||.||.||||||.|.||||||||.|||
BPUM_1496___f 599 AAGAATTGATGGATGAACTTCAGAAAGTAAAAGAAGTAGCGAATCCAGAA 648
BSNT_02614___ 649 GAAATTTTCCTGGTTGTCGATTCAATGACCGGTCAGGACGCTGTGAATGT 698
|||||||||||.|||||.||.||.|||||.|||||.||.|||||.|||||
BPUM_1496___f 649 GAAATTTTCCTTGTTGTTGACTCTATGACAGGTCAAGATGCTGTCAATGT 698
BSNT_02614___ 699 TGCCAAAAGCTTTAATGAACAGCTCGGTTTAACCGGTGTTGTGTTAACTA 748
.||.||||||||||||||||||||.||||||||.||||||||..||||.|
BPUM_1496___f 699 AGCGAAAAGCTTTAATGAACAGCTTGGTTTAACAGGTGTTGTTCTAACGA 748
BSNT_02614___ 749 AGCTGGATGGAGACACACGCGGCGGGGCTGCGCTTTCTATTCGCGCTGTT 798
|.||.||.||.||.|||||.|||||.||.||.|||||.|||||.|||||.
BPUM_1496___f 749 AACTAGACGGGGATACACGAGGCGGTGCAGCACTTTCCATTCGAGCTGTC 798
BSNT_02614___ 799 ACAAACACGCCAATTAAGTTCGCAGGTTTGGGCGAAAAGCTTGATGCGTT 848
||.||.|||||.|||||.|||||.|...|.||.|||||||||||.|||.|
BPUM_1496___f 799 ACCAATACGCCGATTAAATTCGCCGCGCTAGGTGAAAAGCTTGACGCGAT 848
BSNT_02614___ 849 AGAGCCGTTCCATCCTGAACGCATGGCATCAAGGATTCTCGGCATGGGCG 898
.||.||.|||||.||.|||||.|||||||||||.|||||.||||||||.|
BPUM_1496___f 849 TGAACCATTCCACCCAGAACGGATGGCATCAAGAATTCTTGGCATGGGAG 898
BSNT_02614___ 899 ACGTGCTGACATTGATTGAAAAAGCACAGGCCAGCGTTGATGAAGACAAA 948
|.|||||.|||.|||||||||||||||||||.|.|||.||..||||.|||
BPUM_1496___f 899 ATGTGCTTACACTGATTGAAAAAGCACAGGCAAACGTGGACCAAGATAAA 948
BSNT_02614___ 949 GCCAAAGAGCTGGAACAAAAAATGAGAACGATGAGCTTCACATTGGACGA 998
||.||||||||.||||||||||||.|.||.||||||||.|||.|.||.||
BPUM_1496___f 949 GCGAAAGAGCTTGAACAAAAAATGCGGACCATGAGCTTTACACTCGATGA 998
BSNT_02614___ 999 TTTTCTGGAGCAGCTCGGGCAAGTCAGAAACATGGGGCCGCTTGATGAGC 1048
|||.||.||||||||.||.|||||..|.||||||||.||.||||||||..
BPUM_1496___f 999 TTTCCTCGAGCAGCTTGGCCAAGTTCGTAACATGGGTCCACTTGATGAAT 1048
BSNT_02614___ 1049 TTCTGCAAATGATGCCGGGTGCAGGTAAAATGAAAGGCCTGAAAAACATC 1098
|..|.||||||||||||||.||.|||||||||||.||.||.||||||.||
BPUM_1496___f 1049 TGATCCAAATGATGCCGGGAGCCGGTAAAATGAAGGGGCTCAAAAACGTC 1098
BSNT_02614___ 1099 CAAGTTGATGAAAAACAGCTGAATCATGTGGAAGCAATCATTAAATCAAT 1148
|||||.||.|||||.|||||.|||||..|.|||||.||||||||||||||
BPUM_1496___f 1099 CAAGTAGACGAAAAGCAGCTCAATCACATCGAAGCGATCATTAAATCAAT 1148
BSNT_02614___ 1149 GAC-----TGTTCTTGAAAAAGAACAGCCGGATATCATCAATGCCAGCCG 1193
||| .| ||||||||||||||.||..||||||||||.|||||
BPUM_1496___f 1149 GACGACCGAG-----GAAAAAGAACAGCCAGAGGTCATCAATGCAAGCCG 1193
BSNT_02614___ 1194 GCGGAAACGGATTGCAAAAGGAAGCGGGACATCCGTACAGGAAGTCAACC 1243
..|.|||||||||||||||||||||||.|||||.||||||||||||||.|
BPUM_1496___f 1194 AAGAAAACGGATTGCAAAAGGAAGCGGAACATCTGTACAGGAAGTCAATC 1243
BSNT_02614___ 1244 GTCTGCTTAAGCAGTTTGATGAAATGAAAAAAATGATGAAGCAGATGACA 1293
|.||..|.|||||.|||||.|||||||||||.|||||||||||.|||||.
BPUM_1496___f 1244 GCCTTTTAAAGCAATTTGACGAAATGAAAAAGATGATGAAGCAAATGACC 1293
BSNT_02614___ 1294 AACATGTCAAAAGGCAAGAAAAAAGGGTTTAAGCTACCTTTTATGTAA 1341
||||||||.|||||.|||||||||||.|||||..||||.|||||||||
BPUM_1496___f 1294 AACATGTCCAAAGGAAAGAAAAAAGGCTTTAAATTACCATTTATGTAA 1341
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