Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02607 and BPUM_1491
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:11
# Commandline: needle
# -asequence dna-align/BSNT_02607___acpP.1.24716.seq
# -bsequence dna-align/BPUM_1491___acpP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02607___acpP-BPUM_1491___acpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02607___acpP-BPUM_1491___acpP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02607___acpP
# 2: BPUM_1491___acpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 208/234 (88.9%)
# Similarity: 208/234 (88.9%)
# Gaps: 0/234 ( 0.0%)
# Score: 936.0
#
#
#=======================================
BSNT_02607___ 1 ATGGCAGACACATTAGAGCGTGTAACGAAAATCATCGTAGATCGCCTTGG 50
|||||||||..|||||||||||||||.|||||.||.|||||.||||||||
BPUM_1491___a 1 ATGGCAGACGTATTAGAGCGTGTAACAAAAATTATTGTAGACCGCCTTGG 50
BSNT_02607___ 51 CGTTGATGAAGCAGACGTCAAACTTGAAGCTTCTTTCAAGGAAGACTTAG 100
|||||||||.||.|||||.|||.|.||||||||.||.||.|||||.||||
BPUM_1491___a 51 CGTTGATGAGGCTGACGTGAAAATGGAAGCTTCATTTAAAGAAGATTTAG 100
BSNT_02607___ 101 GTGCTGATTCCCTAGATGTAGTTGAGCTTGTTATGGAACTTGAAGACGAG 150
|.|||||||||||.||||||||||||||.|||||||||||||||||.|||
BPUM_1491___a 101 GCGCTGATTCCCTTGATGTAGTTGAGCTAGTTATGGAACTTGAAGATGAG 150
BSNT_02607___ 151 TTTGATATGGAGATTTCTGACGAAGATGCTGAAAAGATTGCAACAGTCGG 200
||.||||||||.|||||||||||||||||||||||.||||||||||||||
BPUM_1491___a 151 TTCGATATGGAAATTTCTGACGAAGATGCTGAAAAAATTGCAACAGTCGG 200
BSNT_02607___ 201 CGACGCTGTGAACTACATACAAAACCAGCAATAA 234
.||||||||||||||||||.|.|.||||||||||
BPUM_1491___a 201 TGACGCTGTGAACTACATAAATAGCCAGCAATAA 234
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